Gene VSAL_I0267 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVSAL_I0267 
Symbol 
ID6986407 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAliivibrio salmonicida LFI1238 
KingdomBacteria 
Replicon accessionNC_011312 
Strand+ 
Start bp314332 
End bp314976 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content38% 
IMG OID643378648 
ProductHTH-type transcriptional regulator, tetR-family 
Protein accessionYP_002261803 
Protein GI209693875 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAACAA AAGACAGAAT AATCCTCGGT GCCTTAACCC TTTTTAACCA AAATGGTGAA 
CGAAATATCA CCACCAACCA TATTTCGGCG CATCTTGAAA TCAGTCCGGG TAATTTGTAT 
TACCACTTTG GCAATAAAGA AGCGATCATC AATAGTATTT TTGATAACTA TGCGAACGAG 
CTAAAAACAC GCTTTAAACC AATGGCAGAA GAAGACCAAT CGACAATGCC TAGTGTACAG 
ATCATGTTGA GTTATTTAGA TTCGATTTTT GAGTTGATGT GGAACTACCG TTTCTTTTAC 
GCCAATTTAC CCGATATCTT AAGCAGAGAT ACGGAGTTAA AAGAAAAATA CACCAAAGCA 
CAAGAATCCC TAAACGATAA CCTTATTAGT ATCATGAAAG GATTTAGAAC TTCAGGCCTT 
ATTGCGCTTG AAGACGATGA ATTACTCGCG CTAACCAAAA CGTTACACCT CGTATCGTCA 
TGCTGGATAA GTTACCAAAC CGCACAATTG TCAGATAAAG AAATAACAGA GGCGGTGGTT 
TATCAAGGCA TGTTACAAAT GCTAAATGTC GTTAGACCAA TAGCAACAGA GCAAGGCAGA 
GCACAGATAT TAGAATTAGA AGCGCATTAT CAAAGCAGAT TATAG
 
Protein sequence
MKTKDRIILG ALTLFNQNGE RNITTNHISA HLEISPGNLY YHFGNKEAII NSIFDNYANE 
LKTRFKPMAE EDQSTMPSVQ IMLSYLDSIF ELMWNYRFFY ANLPDILSRD TELKEKYTKA 
QESLNDNLIS IMKGFRTSGL IALEDDELLA LTKTLHLVSS CWISYQTAQL SDKEITEAVV 
YQGMLQMLNV VRPIATEQGR AQILELEAHY QSRL