| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I0263 |
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| Symbol | |
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| ID | 6986404 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | - |
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| Start bp | 309518 |
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| End bp | 310744 |
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| Gene Length | 1227 bp |
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| Protein Length | 408 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 643378644 |
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| Product | O-antigen ligase WaaL |
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| Protein accession | YP_002261799 |
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| Protein GI | 209693871 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3307] Lipid A core - O-antigen ligase and related enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAA TAAGCTTACC TTTAATTGCT ACAATACTTT GCTTTCTATT CTTCAGCACC
CCTATTATTT ATCCTGACTC TTACGTGGTT GCTCCGCTTT TATTGGCACT ATTTGGTTTG
TTTTTACTGC CAAAAACCTA TCACGCCTTT AAAAACAGAG ACGTTAAATA CATTAGCTTA
TCCATGGTTG GGTATTTTAT TCTTACCATC ATCTCTTTTC TGTATTCAGG AGGAGAAACC
AGCCAACTTG ATATGCCAAG CCGAACGGTG TTGGCCTCTT TCATTTTATG TTTTTTAGTC
ACTTATAAAC CCAATCCGGC ACCACTATTT CTGGCTGCAC CGATTGGAGC GGCGATTGCA
GGCTTCATCA GTTTTTACCA TAGCTTTTAT ATTGGCGGGT GTGCTTTTGT CGGTACGTTT
GGTTACATGC CAATTCAAAT TGGAGGTATT ATCGCCTCAT TAGCCACATT CTCTGTTATC
TCGTTTTTTT ATTACCGTAA AACAGAACAG AAGAACTTTG CTGTATTCAG CTTCGTTGCC
GCTAATTTAG GCTACATCGC CACGTTATTA TCTGGTGCTC GCGGTGCTTG GCTATTAACT
CCCTTTGTTT TACTTATTGT TCTGTATTTA AATAAAGAGT TAATAAATAA AAAAATAGTC
GGTTACGCTC TACTTGCTGC AATTATCGAT TTATCTATTG CCTCAGCCCA AATCACTTCT
CGACTTGATG CAATACAGTC TGATTTAACT CAATACTCAG CTGAACAATC CGCTAGTTCT
TCTGGTGCAC GCTTAGAGAT GTGGAAATCT GCATTATATA GCGCACAAGA ATCCCCATTA
TTTGGTCAAG GATTTTCTGG TATTGAAGCA GCAAAACAGC GCCAACTCGA CGCTGGACTC
ATAGATCCAA TTGCCTTGAA ATACTCTCGA GCTCATAACC AATATTTAGA AGATTTACAA
ACCAAAGGGA TTTTTGGTCT CTCTGTATTG CTGATCATGT TTGCGGTGCC TTTTGCTTTT
TTCAAAAGAA ACCTGAAACA ATATATCAAT GATTCAGACA AAGACACACA CTACTTTTTG
GCCCTAATGG GAGCCTCGCA CGTCGCACTG GTTGCAGGCT ATGCCCTTAC CCAACATTAC
TTATCACATC ACTCAGGCAT TTTATTCTTT GCCGTTGGCA TCGCCATACT GAGCGCCTTA
GTGATTAACC AAAGAAAACC ATCATGA
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| Protein sequence | MKKISLPLIA TILCFLFFST PIIYPDSYVV APLLLALFGL FLLPKTYHAF KNRDVKYISL
SMVGYFILTI ISFLYSGGET SQLDMPSRTV LASFILCFLV TYKPNPAPLF LAAPIGAAIA
GFISFYHSFY IGGCAFVGTF GYMPIQIGGI IASLATFSVI SFFYYRKTEQ KNFAVFSFVA
ANLGYIATLL SGARGAWLLT PFVLLIVLYL NKELINKKIV GYALLAAIID LSIASAQITS
RLDAIQSDLT QYSAEQSASS SGARLEMWKS ALYSAQESPL FGQGFSGIEA AKQRQLDAGL
IDPIALKYSR AHNQYLEDLQ TKGIFGLSVL LIMFAVPFAF FKRNLKQYIN DSDKDTHYFL
ALMGASHVAL VAGYALTQHY LSHHSGILFF AVGIAILSAL VINQRKPS
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