Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I0261 |
Symbol | |
ID | 6986402 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | - |
Start bp | 307195 |
End bp | 308457 |
Gene Length | 1263 bp |
Protein Length | 420 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 643378642 |
Product | 3-deoxy-D-manno-octulosonic-acid transferase |
Protein accession | YP_002261797 |
Protein GI | 209693869 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1519] 3-deoxy-D-manno-octulosonic-acid transferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTAATCC GACTAGTTTA TACCTTACTA TTAACACTTC TCTCTCCTGT TTTATTGTTT GGTTTATATA AGAAAAAACC AAACAAACCT CAATTTGGTG ACCGCTGGAA GGAGCACTTT GGATTTACTC CTACGCTAAA AAAAAGCGAA CAACCACTCT GGATTCATGC GGTTTCAGTT GGAGAAGCGA TTGCTGCGAC ACCATTAATT AAAGCATTAA AACAGCAGAG CCCTGAACAG CCAATCCTAG TGACAACCAC AACAAGCACG GGTGCAGAGC AGATTGCCAA GTTAGGTGAT TTAGTTGAAC ACCGCTATAT GCCTATTGAT TTCCCATTTG CTGTGAACGG ATTTTTAAAA ACGGTTAATC CAAGTAAATT ACTGATTATT GAAACAGAGC TGTGGCCAAA TACCTTACAT TCTGTCGGTA AATCTAACAT TCCTATTTAT GTGGTTAACG CACGTTTATC TGAGAAGTCT TGCCAAGGCT ACACCAAAAT TCAACCTGTT TTTACCGAGC TAAGTAAGCA CTTAACAAAA GTACTATGCC AAACCCAAGC GGATGCAGAT CGCTTTGCGC GTTTAGGTAT CAATAAAGAA AGATTATGTG CTACTGGCTC TATCAAATTT GATATTCAAA TCTCGGATGA GATAAAACAG CAAGGCCAAG AGTTACGTCA GCTATTAGAC AATGACCGCC CTATTTGGAT TGCAGCTAGT ACTCATAAAG GTGAAGATGA ACAAGTTCTT GATGCTCATA AAGAAGTATT GAAAGAGCAC CCTAACGCCT TGTTAATCTT GGTACCTCGC CACCCTGAGC GTTTTGATAC GGTATTTGAA TTAAGTAAAA ACTCGGGATT TAGCAGTATA AGACGCACCT CTAACAAAAC GGTTACCGCT GAAACTCAAG TTTATCTTGG TGATACCATG GGTGAAATGC TAGTTCTGAT CGGCGCGGCT GATGTGTGCT TTATGGGCGG GAGTTTACTT GGCGATAAAG TCGGTGGGCA CAATGTTTTA GAGCCTGCTG CGCTAGGTGT GCCTGTTATT ATAGGGCCGA GTTATTATAA CTTTAAAGAG ATTGTGGATA CGTTACGAGG TGAACAAGGG ATTGTTATTT GTGAGCCGAC TCAACTTAGT AATCACATCG TCAAGCTGAT TGATGATAGT ACTGAATATC AATTACTTCA AAACTCCGCT TCTAATGTTG TTCAAAGTAA TCAAGGTGCT TTAAATCGTA CGATCGCTAT CTCAAATATA TAA
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Protein sequence | MLIRLVYTLL LTLLSPVLLF GLYKKKPNKP QFGDRWKEHF GFTPTLKKSE QPLWIHAVSV GEAIAATPLI KALKQQSPEQ PILVTTTTST GAEQIAKLGD LVEHRYMPID FPFAVNGFLK TVNPSKLLII ETELWPNTLH SVGKSNIPIY VVNARLSEKS CQGYTKIQPV FTELSKHLTK VLCQTQADAD RFARLGINKE RLCATGSIKF DIQISDEIKQ QGQELRQLLD NDRPIWIAAS THKGEDEQVL DAHKEVLKEH PNALLILVPR HPERFDTVFE LSKNSGFSSI RRTSNKTVTA ETQVYLGDTM GEMLVLIGAA DVCFMGGSLL GDKVGGHNVL EPAALGVPVI IGPSYYNFKE IVDTLRGEQG IVICEPTQLS NHIVKLIDDS TEYQLLQNSA SNVVQSNQGA LNRTIAISNI
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