Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I0243 |
Symbol | rmlB |
ID | 6986391 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | + |
Start bp | 289174 |
End bp | 290265 |
Gene Length | 1092 bp |
Protein Length | 363 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 643378627 |
Product | dTDP-D-glucose-4,6-dehydratase |
Protein accession | YP_002261782 |
Protein GI | 209693854 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1088] dTDP-D-glucose 4,6-dehydratase |
TIGRFAM ID | [TIGR01181] dTDP-glucose 4,6-dehydratase |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATATTT TAGTCACCGG CGGCGCAGGT TTTATTGGCT CAGCAGTTAT TCGCCACATT ATCAGCAATA CATCAAACTC TGTCATCAAT GTTGATTCTC TTACCTACGC AGGAAATCTA GAGTCTTTGA GTCAGGTTGA AGCATCAGAT CGTTATTCAT TTGAACACGT TGATATCTGT AATCGCACTG AACTTGACCG TATTTTTTCT GAATATCAAC CTGATGCAGT CATGCACCTA GCTGCTGAGT CACATGTAGA TCGCTCAATA GATGGCCCTG CTGCGTTCAT TGAAACTAAT ATTGTCGGTA CTTATACTTT ACTTGAAGCA ACGCGTGCCT ATTGGAATTT GTTAGCTGAT GATAAAAAGC AAGCCTTTCG TTTTCACCAT ATATCAACGG ATGAAGTGTA TGGTGATTTA GAAGGTACAG ATGATTTGTT TACCGAAACA ACCCCTTATG AGCCATCAAG CCCTTATTCC GCGTCTAAAG CTTCTTCAGA TCATTTAGTT CGTGCATGGC AACGTACTTA TGGCCTACCA ACAGTTATTA CTAATTGTTC AAATAACTAT GGGCCATATC ATTTCCCTGA AAAGCTGATC CCATTAATGA TTTTAAATGC CTTAGAAGGT AAGTATTTAC CTGTTTATGG CAATGGAATG CAAATTCGAG ACTGGTTGTT TGTAGAAGAC CATGCTCGCG CGCTATATAA AGTCGTTACT GAAGGTGAGA TTGGCGAAAC CTACAATATT GGTGGTCATA ACGAAAAAGC CAATATTGAA GTAGTTAAGA CCATTTGCTC ATTACTTGAA GAGTTAGTGC CGAACAAACC TGAAGGTGTT GCTCAGTACC TTGATTTAAT TACCTACGTA ACAGACCGCC CTGGTCATGA TGTTCGTTAT GCTATTGATG CTTCAAAAAT TGAGCATGAA TTAGGGTGGA AACCAGAAGA GAGCTTTGAA TCAGGGATCC GAAAAACCGT TCAATGGTAT TTAGACAATA AACAATGGTG GTCACGCGTC CTTGATGGGT CTTATGCAGG AGAACGTTTA GGCGTATCAA GTGAACAGGT TGTACATAAG GAAATTAGAT AA
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Protein sequence | MNILVTGGAG FIGSAVIRHI ISNTSNSVIN VDSLTYAGNL ESLSQVEASD RYSFEHVDIC NRTELDRIFS EYQPDAVMHL AAESHVDRSI DGPAAFIETN IVGTYTLLEA TRAYWNLLAD DKKQAFRFHH ISTDEVYGDL EGTDDLFTET TPYEPSSPYS ASKASSDHLV RAWQRTYGLP TVITNCSNNY GPYHFPEKLI PLMILNALEG KYLPVYGNGM QIRDWLFVED HARALYKVVT EGEIGETYNI GGHNEKANIE VVKTICSLLE ELVPNKPEGV AQYLDLITYV TDRPGHDVRY AIDASKIEHE LGWKPEESFE SGIRKTVQWY LDNKQWWSRV LDGSYAGERL GVSSEQVVHK EIR
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