Gene VSAL_I0243 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVSAL_I0243 
SymbolrmlB 
ID6986391 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAliivibrio salmonicida LFI1238 
KingdomBacteria 
Replicon accessionNC_011312 
Strand
Start bp289174 
End bp290265 
Gene Length1092 bp 
Protein Length363 aa 
Translation table11 
GC content40% 
IMG OID643378627 
ProductdTDP-D-glucose-4,6-dehydratase 
Protein accessionYP_002261782 
Protein GI209693854 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1088] dTDP-D-glucose 4,6-dehydratase 
TIGRFAM ID[TIGR01181] dTDP-glucose 4,6-dehydratase 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATATTT TAGTCACCGG CGGCGCAGGT TTTATTGGCT CAGCAGTTAT TCGCCACATT 
ATCAGCAATA CATCAAACTC TGTCATCAAT GTTGATTCTC TTACCTACGC AGGAAATCTA
GAGTCTTTGA GTCAGGTTGA AGCATCAGAT CGTTATTCAT TTGAACACGT TGATATCTGT
AATCGCACTG AACTTGACCG TATTTTTTCT GAATATCAAC CTGATGCAGT CATGCACCTA
GCTGCTGAGT CACATGTAGA TCGCTCAATA GATGGCCCTG CTGCGTTCAT TGAAACTAAT
ATTGTCGGTA CTTATACTTT ACTTGAAGCA ACGCGTGCCT ATTGGAATTT GTTAGCTGAT
GATAAAAAGC AAGCCTTTCG TTTTCACCAT ATATCAACGG ATGAAGTGTA TGGTGATTTA
GAAGGTACAG ATGATTTGTT TACCGAAACA ACCCCTTATG AGCCATCAAG CCCTTATTCC
GCGTCTAAAG CTTCTTCAGA TCATTTAGTT CGTGCATGGC AACGTACTTA TGGCCTACCA
ACAGTTATTA CTAATTGTTC AAATAACTAT GGGCCATATC ATTTCCCTGA AAAGCTGATC
CCATTAATGA TTTTAAATGC CTTAGAAGGT AAGTATTTAC CTGTTTATGG CAATGGAATG
CAAATTCGAG ACTGGTTGTT TGTAGAAGAC CATGCTCGCG CGCTATATAA AGTCGTTACT
GAAGGTGAGA TTGGCGAAAC CTACAATATT GGTGGTCATA ACGAAAAAGC CAATATTGAA
GTAGTTAAGA CCATTTGCTC ATTACTTGAA GAGTTAGTGC CGAACAAACC TGAAGGTGTT
GCTCAGTACC TTGATTTAAT TACCTACGTA ACAGACCGCC CTGGTCATGA TGTTCGTTAT
GCTATTGATG CTTCAAAAAT TGAGCATGAA TTAGGGTGGA AACCAGAAGA GAGCTTTGAA
TCAGGGATCC GAAAAACCGT TCAATGGTAT TTAGACAATA AACAATGGTG GTCACGCGTC
CTTGATGGGT CTTATGCAGG AGAACGTTTA GGCGTATCAA GTGAACAGGT TGTACATAAG
GAAATTAGAT AA
 
Protein sequence
MNILVTGGAG FIGSAVIRHI ISNTSNSVIN VDSLTYAGNL ESLSQVEASD RYSFEHVDIC 
NRTELDRIFS EYQPDAVMHL AAESHVDRSI DGPAAFIETN IVGTYTLLEA TRAYWNLLAD
DKKQAFRFHH ISTDEVYGDL EGTDDLFTET TPYEPSSPYS ASKASSDHLV RAWQRTYGLP
TVITNCSNNY GPYHFPEKLI PLMILNALEG KYLPVYGNGM QIRDWLFVED HARALYKVVT
EGEIGETYNI GGHNEKANIE VVKTICSLLE ELVPNKPEGV AQYLDLITYV TDRPGHDVRY
AIDASKIEHE LGWKPEESFE SGIRKTVQWY LDNKQWWSRV LDGSYAGERL GVSSEQVVHK
EIR