| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I0233 |
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| Symbol | hemN |
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| ID | 6986385 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | + |
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| Start bp | 279179 |
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| End bp | 280552 |
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| Gene Length | 1374 bp |
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| Protein Length | 457 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 643378618 |
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| Product | coproporphyrinogen III oxidase |
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| Protein accession | YP_002261773 |
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| Protein GI | 209693845 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0635] Coproporphyrinogen III oxidase and related Fe-S oxidoreductases |
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| TIGRFAM ID | [TIGR00538] oxygen-independent coproporphyrinogen III oxidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.891625 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCAAATC AACAAATAGT ATGGGACCAA GCGATCATAG AGAAGTATAA CTACTCTGGT
CCTCGCTACA CCTCTTACCC AACCGCTTTA GAGTTTCATG AAGCGTATAC TCCTGCTGAA
TTCGACATGG CGTGTACTCA GTATCCTGAG CGACCACTGT CTCTGTATAT CCATATCCCA
TTTTGTCACA AGCTGTGTTA TTTCTGTGGC TGTAATAAAG TCATTACTCG TCATCATCAT
AAAGCGGACA TCTACTTAGA CTCATTAGAG TTAGAGATCC GTCAACGAGC GGCGTTATTT
ACCGATCGTA AAGTAACCCA GTTGCATTTT GGTGGCGGCA CACCAACGTT TTTAACGAAA
ATCCAATTTA CTCGCTTAAT GAATTTATTA CGTGGTGAAT TTCATTTTGA AGCGGGTGCT
GAGATCAGTA TCGAAGTTGA TCCACGTGAA ATTGAATTGG ATATGTTGGA TCACTTACGT
GATGAAGGGT TCAATCGTTT AAGTATTGGT GTTCAAGACT TTAATAAAGA AGTTCAGTTA
TTGGTTAACC GTGATCAAGA TGAAGACTTT ATTATCTCTA TGGTGCAGCG AGCGAAAGAA
TTAGGTTTCC GTTCAACTAA CCTTGATTTG ATTTATGGTT TACCAAAACA GTCCGCAGAA
TCATTAGCTA TCACGATTAA GCGCGTACTT GAAATGGAAC CGGGTCGTTT GTCTGTTTTT
AACTACGCAC ACATGCCAAC CTTATTTGCT GCGCAGCGTA AAATTAAAGA CGCCGATTTA
CCTGCACCCG CGGAAAAATT GGTGATGCTG CAAGACACCA TTGAAACGTT AACTGGTGCC
GGTTACCAGT TTATCGGAAT GGATCACTTT GCACTGCCTG ATGATGAGTT AGCGGTCGCG
CAACGTGATG GCATTCTTCA CCGTAATTTC CAAGGTTACA CCACTCAAGG TGAGTGTGAT
TTATTGGGTA TGGGTGTATC AGCTATCTCT ATGATTGGCG ACAGTTACGC ACAGAATAAG
AAAGATTTAA AAGAATATTA CGCACAGGTG GATGATAAGC GTCATGCATT GTGGCGTGGT
GTTGCACTTG ATCAGGATGA TTTAATTCGT CGTGAAGTGA TTAAACAGCT GATCTGTAAT
TTCACGCTAG ATACTAAAGC GATTGAAGTC GAGTTTAATT TAGATTTTGC TACGTACTTT
GCAGAAGATT TTAAATTGCT GCAAACGTTT GTCGATGATG AGCTTGTGTC TCTGCATGAA
GGCCGTATTG ATGTTGAATT ACGTGGTCGT TTATTGATCC GTAATATCTG TATGTGTTTT
GATAAATACC TTCGTGACCG TGCGCGTCAA CAGCAGTTTT CTAGAGTTAT CTAA
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| Protein sequence | MSNQQIVWDQ AIIEKYNYSG PRYTSYPTAL EFHEAYTPAE FDMACTQYPE RPLSLYIHIP
FCHKLCYFCG CNKVITRHHH KADIYLDSLE LEIRQRAALF TDRKVTQLHF GGGTPTFLTK
IQFTRLMNLL RGEFHFEAGA EISIEVDPRE IELDMLDHLR DEGFNRLSIG VQDFNKEVQL
LVNRDQDEDF IISMVQRAKE LGFRSTNLDL IYGLPKQSAE SLAITIKRVL EMEPGRLSVF
NYAHMPTLFA AQRKIKDADL PAPAEKLVML QDTIETLTGA GYQFIGMDHF ALPDDELAVA
QRDGILHRNF QGYTTQGECD LLGMGVSAIS MIGDSYAQNK KDLKEYYAQV DDKRHALWRG
VALDQDDLIR REVIKQLICN FTLDTKAIEV EFNLDFATYF AEDFKLLQTF VDDELVSLHE
GRIDVELRGR LLIRNICMCF DKYLRDRARQ QQFSRVI
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