Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I0231 |
Symbol | |
ID | 6986383 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | + |
Start bp | 278025 |
End bp | 278573 |
Gene Length | 549 bp |
Protein Length | 182 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 643378616 |
Product | hypothetical protein |
Protein accession | YP_002261771 |
Protein GI | 209693843 |
COG category | [S] Function unknown |
COG ID | [COG3078] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.263172 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCCGTA CTAAAAAAGC CCGTACTCCG GGAATGGCGA GTGAGCCAGT AGTTGTAACA CGTAACCGTA CCGATCGTGA CGTAGACAGT CGTGAAATTA AGCGTAAAAA GAAACGTAAA GGCCTAAAAC CTGGAGCTCG TAACGTTGAA AGCGATTCAG AGAAAGCACG TCGTTTTTCT CAGAATAAAG ATCCTCGTAT TGGCAGTAAA AAACCAATTC AACTTGTTGT TGAAGAGAAG AAGAAATCAA GCAAGCAAGA GCGTCGTTTA ACTAATGAGC AAGAATTGGC TCAATTAGAA AATGATGCGC AATTGATGGT TCTTCTTGAT CGTATCGATA ATGGTGAAAA CCTAGGTATG GGTCTGCAAA AATACGTAGA TGAAAAATTA GCACGTATTG AGCACTTAAT GGGTCGTTTA GGCTTATTAG AAGACGAAGA GACAGAAGAA GAAATTGCTG AATTCCCTGA GTTCGCGGCG CCTAAAACAA AAAGCGACGA TGACCTATTA GCTGAATTTG ATAATTTCAA CATGGATGAT TTTAAATAA
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Protein sequence | MSRTKKARTP GMASEPVVVT RNRTDRDVDS REIKRKKKRK GLKPGARNVE SDSEKARRFS QNKDPRIGSK KPIQLVVEEK KKSSKQERRL TNEQELAQLE NDAQLMVLLD RIDNGENLGM GLQKYVDEKL ARIEHLMGRL GLLEDEETEE EIAEFPEFAA PKTKSDDDLL AEFDNFNMDD FK
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