Gene VSAL_I0226 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVSAL_I0226 
Symbol 
ID6986380 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAliivibrio salmonicida LFI1238 
KingdomBacteria 
Replicon accessionNC_011312 
Strand+ 
Start bp270782 
End bp271447 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content40% 
IMG OID643378608 
Producthypothetical protein 
Protein accessionYP_002261766 
Protein GI209693838 
COG category[S] Function unknown 
COG ID[COG1738] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00697] conserved hypothetical integral membrane protein 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTACAT TTACGCCCGC GCAACAGCGC AACGCTTTAT CTTTCCTTGT TTTATTTCAT 
CTTGTCATCA TTGCATCAAG TAACTATTTG GTTCAAATCC CATTCACTTT GTTTTGGTTT 
CATACCACAT GGGGTGCATT TACCTTCCCG TTCATTTTCT TAGCGACAGA CTTAACGGTT 
CGAATTTTTG GTGCCAAAAT GGCAAGAAGT ATTATCTTCT TTGTTATGTT GCCAGCACTG 
GCGGTATCGT ATGTCTTATC CGTCGTGTTC TTTGAAGGTC AGTATCAAGG TCTTTTACAT 
CTGAGTGAAT TTAATTTATT CGTTGCTCGA ATTGCGGTCG CCAGTTTTAT GGCTTATTTA 
CTGGGTCAAA TCTTAGATGT GTATGTGTTT AATCGTCTTC GACAGTTAAA GCAGTGGTGG 
ATTGCCCCAA CGTGTTCAAC GTTGTTTGGT AACGCATTAG ATACGTTGGC ATTTTTTGCT 
ATTGCCTTTT ACCAAAGTCC AGATGCTTTC ATGGCTGAAC ATTGGACTGA AATCGCTTTG 
GTTGATTATA GTATTAAGCT TGTGATCAGT TTAGGGCTAT TTGTTCCTAT GTATGGTGTG 
CTGTTGAATT ACCTAATTCG CAAACTCACT TCGGAAGGAC ATCAGCTTGC TACTCAAGCA 
TCATAA
 
Protein sequence
MSTFTPAQQR NALSFLVLFH LVIIASSNYL VQIPFTLFWF HTTWGAFTFP FIFLATDLTV 
RIFGAKMARS IIFFVMLPAL AVSYVLSVVF FEGQYQGLLH LSEFNLFVAR IAVASFMAYL 
LGQILDVYVF NRLRQLKQWW IAPTCSTLFG NALDTLAFFA IAFYQSPDAF MAEHWTEIAL 
VDYSIKLVIS LGLFVPMYGV LLNYLIRKLT SEGHQLATQA S