Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I0222 |
Symbol | uvrD |
ID | 6988364 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | + |
Start bp | 264252 |
End bp | 266456 |
Gene Length | 2205 bp |
Protein Length | 734 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 643378604 |
Product | DNA-dependent helicase II |
Protein accession | YP_002261762 |
Protein GI | 209693834 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0210] Superfamily I DNA and RNA helicases |
TIGRFAM ID | [TIGR01075] DNA helicase II |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.211627 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACGTTT CTTTTCTTCT TGATGGTCTT AATGACAAAC AGCGCGAAGC CGTAGCCGCT CCGTTAGAAA ACATGCTTGT ACTTGCGGGT GCCGGTAGTG GTAAAACTCG AGTACTTGTT CATCGTATCG CATGGTTAAT GCAAATCGAG CAAGCGTCGC CCTTCTCAAT TATGTCGGTG ACATTTACCA ATAAAGCCGC CGCTGAAATG CGTGGTCGTA TTGAAGAATT AATGCATGGC AGCGCAGGGG GAATGTGGAA CGGTACTTTT CATGGTATTT GTCACCGTAT TCTTCGTGCT CATTATCTTG ATGCGAAACT GCCTGAAGGT TTTCAGATCA TCGACTCTGA TGATCAACAA CGCTTATTAA AGCGTTTGAT TAAAGCGCAG AACTTGGATG ATAAAAACTG GCCTGCACGT CAAGCTGCAT GGTTCATCAA TGGGAAAAAA GATGAAGGTT TACGCCCGCA TCAAATTAAC TCATTTAATG ATCCTATCGC TGAAACATGG TTAAAAGTGT ATCGCGCTTA TCAAGAAGCT TGTGATCGTT CAGGCTTGGT CGATTTTGCT GAAATTCTTC TTCGTGCTCA TGAACTATTG CGTGATCATC AGTATATCTG CGAACACTAC CAAGCTCGCT TTAAGCACAT TCTTGTCGAC GAATTCCAAG ATACGAACAA CATTCAATAT GCATGGCTAC GTATGATGGC AGGCTCGGAT TGTAAGGTCA TGATCGTTGG GGATGATGAT CAATCAATCT ATGGTTGGCG TGGTGCTCAA ATTGAAAATA TTCAACGATT CTTAAATGAA TTTGTTGGTG CTAAAACCAT CCTTTTAGAG CAAAACTACC GTTCAACAGC CAATATATTG AATGCTGCCA ATGAATTGAT CAGTAACAAT ACCGAGCGAA TGGGCAAAGA GCTGTGGACT GAAGACGCTG ATGGCGAGTT GATTTCAATC TATTCAGCTT ACAATGAAAT GGACGAAGCT CGTTTTGCGG TTGGAAAAAT TAAAGAATGG CGCGATAACG GGGGAGCATT AGAAGATACC GCTTTCTTAT ATCGTAATAA TGCTCAATCT CGAGTTCTTG AAGAAGCCTT AATACAAGCA GGTTTACCTT ATCGTATTTA TGGTGGGATG CGATTCTTTG AACGTCAAGA AATCAAAGAT GCACTGTCCT ACTTACGTTT AATGAATAAT CGTAATGATG ATGCTGCGTT TGAACGTGTC GTAAATACGC CAACACGAGG CCTAGGTGAC AAAACTCTGG AAACTGTGCG TTTGGCAGCG CGTGAACGTG GTGCAACCAT GTGGCAAGCA AGTATTGCCT TAATCGAAGA ACAAGTATTA CCTGGGCGTG CGGCGGGAGC GTTAGGTCGT TTCGTTGAGC TAATTAATGC GCTAGAAGAT GATACACGTG ATTGCCGTCT GCATGAACAA ACTGACCAAG TGATTAAAAG CTCGGGTTTG TTTACTATGT ACGAACAAGA AAAAGGCGAA AAATCGAAAG CGCGTATTGA AAACTTGGAA GAATTAGTGA CCGCAACGCG TCAATTTGAT AAACCTGAAG AAGCAGAAGA AATGACGGAT TTAACCGCAT TCTTGACGCA TGCCGCATTA GAAGCGGGTG ATGGTCAGGC GGATGAATTT GAAGATGCGG TGCAATTAAT GACGTTGCAC AGTGCAAAAG GGTTAGAGTT TCCTTTGGTC TTTATGGTGG GTGTTGAAGA GGGTATGTTC CCAAGTCAAA TGTCAGCAGA AGAAGCAGGG CGTTTAGAAG AAGAACGTCG TCTTTGTTAT GTTGGTATGA CTCGTGCGAT GGAGAAGCTC TATATTCTTT ACGCAGAAAC TCGTCGAGTG TATGGGCAAG AGAAATTTCA TAAGCCATCA CGCTTTATTA AAGAAATCTC GGCAAAGTTT GTTGAAGAAG TTCGCATGAA AGCAAAAGTC AGCCGAACCA GTTTATATGG TAGCTATGGC TCTCAAAGTG AGTCATCCCA AGAGCGTTTT GGTCAAACGG CAATGAGTAA TAGCTTTAAT GAAACGGGCT ACAATTTAGG GCAGCGAGTG AAGCATCCTA AATTTGGTGA AGGAACGATC ATCAATTTTG AAGGTGCTGG CCCACAAGGG CGTGTTCAGG TTGCTTTTAA TGGTGAAGGG ATCAAATGGC TTGTAACGCA ATACGCGAAA TTAGAGTCGG TGTAA
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Protein sequence | MDVSFLLDGL NDKQREAVAA PLENMLVLAG AGSGKTRVLV HRIAWLMQIE QASPFSIMSV TFTNKAAAEM RGRIEELMHG SAGGMWNGTF HGICHRILRA HYLDAKLPEG FQIIDSDDQQ RLLKRLIKAQ NLDDKNWPAR QAAWFINGKK DEGLRPHQIN SFNDPIAETW LKVYRAYQEA CDRSGLVDFA EILLRAHELL RDHQYICEHY QARFKHILVD EFQDTNNIQY AWLRMMAGSD CKVMIVGDDD QSIYGWRGAQ IENIQRFLNE FVGAKTILLE QNYRSTANIL NAANELISNN TERMGKELWT EDADGELISI YSAYNEMDEA RFAVGKIKEW RDNGGALEDT AFLYRNNAQS RVLEEALIQA GLPYRIYGGM RFFERQEIKD ALSYLRLMNN RNDDAAFERV VNTPTRGLGD KTLETVRLAA RERGATMWQA SIALIEEQVL PGRAAGALGR FVELINALED DTRDCRLHEQ TDQVIKSSGL FTMYEQEKGE KSKARIENLE ELVTATRQFD KPEEAEEMTD LTAFLTHAAL EAGDGQADEF EDAVQLMTLH SAKGLEFPLV FMVGVEEGMF PSQMSAEEAG RLEEERRLCY VGMTRAMEKL YILYAETRRV YGQEKFHKPS RFIKEISAKF VEEVRMKAKV SRTSLYGSYG SQSESSQERF GQTAMSNSFN ETGYNLGQRV KHPKFGEGTI INFEGAGPQG RVQVAFNGEG IKWLVTQYAK LESV
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