| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I0219 |
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| Symbol | hemD |
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| ID | 6988650 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | - |
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| Start bp | 259699 |
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| End bp | 260445 |
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| Gene Length | 747 bp |
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| Protein Length | 248 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 643378601 |
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| Product | uroporphyrinogen III synthase HemD |
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| Protein accession | YP_002261759 |
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| Protein GI | 209693831 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1587] Uroporphyrinogen-III synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACCATAT TGGTGACTCG CCCAGAGCAA GAGAGCCAAG CACTCTGTGA TGCCCTACAC
CAAGCAGGGC ACCTCGCCAT TTCTCATCCT TTGTTAACCA TACATCCAGG ACGAGAACTT
TCTCAACTGC CTTCTCTTTT TTCTTCTCTG TCTGATGGTG ATTTTATCAT CGCCGTAAGC
CAACATGCTG TTGAACATGC GCAGAACAGC CTTCAAATGC AGCAAACGGA ATGGAAAAAA
GGGGTAAATT ATATTGCGGT TGGTCAAAAG AGCGCTCAAC ACCTCAAAAA GTATGTTGTA
GATACAGTAC ACTTTCCAAC ACACAGCGAT AGCGAACATT TATTGGCTCT TCCTGTTTTA
AAAAACACAA AAGGAAAGAA AGCCCTCATT TTACGAGGCA ATGGCGGACG AGACTTAATA
TTTCAAGCGC TTGACAATTC GGGGGTAGAA GTCTCTTATT GTGAAACATA TCAACGAAAA
AACACACCAT TTAATGGCGC ATTAAAAGCA GCAGAATGGC AAAAAGAGCA CGTAGATACA
ATCATAGTGA CCAGCGGAGA ACAACTGTCC TTCTTCACTG AACAATTCAC ACTCATACAT
TTACACTGGG TACTGCACTG TCGTTTATTA GTACCGAGTG AACGAATTAA CCAACTTGCT
CAACAACTTG GTTATCAACA TATAGAAACG GTTGGCGGAG CCTCTAATTC CGATGTGCTG
CACTATCTCA GTGAGCATCA TGCATGA
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| Protein sequence | MTILVTRPEQ ESQALCDALH QAGHLAISHP LLTIHPGREL SQLPSLFSSL SDGDFIIAVS
QHAVEHAQNS LQMQQTEWKK GVNYIAVGQK SAQHLKKYVV DTVHFPTHSD SEHLLALPVL
KNTKGKKALI LRGNGGRDLI FQALDNSGVE VSYCETYQRK NTPFNGALKA AEWQKEHVDT
IIVTSGEQLS FFTEQFTLIH LHWVLHCRLL VPSERINQLA QQLGYQHIET VGGASNSDVL
HYLSEHHA
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