| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I0212 |
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| Symbol | spoT |
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| ID | 6989187 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | + |
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| Start bp | 252018 |
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| End bp | 254147 |
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| Gene Length | 2130 bp |
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| Protein Length | 709 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 643378595 |
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| Product | bifunctional (p)ppGpp synthetase II/ guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase |
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| Protein accession | YP_002261753 |
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| Protein GI | 209693825 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases |
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| TIGRFAM ID | [TIGR00691] (p)ppGpp synthetase, RelA/SpoT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGATTTAT TCGATAGCCT GAAAGATGTT GCCAAAGATT ATTTGCCAGA GCCTCACATT
GAGGCTCTTC GTCGATCTTA TCTGGTAGCA AAAGAGGCCC ATGAAGGGCA AACTCGCTCA
ACGGGCGAAC CTTATATCAT TCACCCAGTA GCTGTGGCTC GTATCCTTGC AGAAATGCGA
CTCGACCACA AAACGCTAAT GGCTGCATTA CTTCATGATG TCATTGAAGA CACCCAAGTA
AGCAAGGAAG AACTTGCAGA GCAGTTTGGC GATACCGTTG CTGAATTAGT GGATGGCGTT
TCTAAGCTGG ACAAACTTAA GTTCCGCGAT AAAAAAGAAG CGCAGGCTGA AAACTTCCGA
AAAATGGTCA TGGCGATGGT GCAAGACATC CGCGTTATTT TGATCAAACT TGCTGACCGT
ACTCATAACA TGCGTACACT CGGTGCTTTG CGCCCTGACA AACGTCGTCG TATTGCTCGT
GAAACCCTCG AAATATTCTC TCCTTTGGCA CATCGCCTTG GTATCCACAA TATCAAAACT
GAATTAGAAG AACTTGGTTT TGAAGCGCTT TACCCTAATC GCTATCGCGT ATTAAAAGAA
GTGGTAAAGT CAGCTCGTGG CAACCGTAAA GAGATGATCC AAAAAATCCA CGCAGAAATT
GAAGGCCGTA TTGCTGAAGC TGGCATTAAA GGTCGTGTGG TTGGTCGTGA GAAGAACTTG
TTCGCCATCT ATCATAAGAT GAAAAATAAA GAACAGCGCT TCCACACGAT TATGGATATT
TACGCCTTCC GAGTCATCAC TGATGATGTT GATACCTGTT ATCGCGCATT AGGTCAGGTT
CATAGTATTT ATAAACCTCG CCCTGGTCGC ATTAAAGATT ACATTGCAGT CCCTAAAGCC
AACGGCTACC AATCTCTTCA TACGTCAATG GTTGGCCCGC ATGGTGTCCC TGTTGAAGTA
CAAATTCGTA CCGAAGATAT GGAGCAAATG GCAAATAAAG GGGTTGCTGC ACATTGGTCG
TACAAAGAGG GTGATAACTC AAGCAGTACG ACAGCTCAAA TTCGTGCTCA GCGTTGGATG
CAAAGCCTAC TTGAGCTTCA ACAAAGTGCA GGTAGCTCAT TTGAATTTAT TGAAAACGTA
AAGTCGGATT TATTCCCGAA CGAAATTTAC GTCTTCACTC CTAAAGGCCG TATTTTTGAA
CTGCCAGTAG GTGCTACTGC GGTCGATTTC GCTTATGCCG TTCACTCAGA TGTTGGTAAT
AGCTGTGTTG GCTCTCGTGT AAACCGTCAA CCTTATCCAT TAAGTAAACC TCTGAAAAGT
GGCCAAACGG TTGAGATAAT TAGTGCTCCA GGTGCGCGTC CAAACGCGGC TTGGTTAAAC
TATGTGGTTA CCTCTAAAGC TCGAACTAAG ATCCGTCAAG TGCTTAAAAC AATGCGCAAA
GAAGACTCTG TTATTTTGGG TCGTCGCCTA TTGAATCATG CATTGGGGCA TAATTTATCT
TTAGATGATG TTTCTGAAGA AAACATGACG CACGTTTTAT CGGATCTTAA GCTAGCTACA
CAAGACGATT TATTAGCGGC GATTGGTCTA GGCGAATTAA TGAGTATTGT GGTTGCTCGC
CGATTGCTTG GTGATGCCGA CGAATTGACC CAACAAAACC CGTCTAACAT TGAAACCTCG
ACAGGTAAGA AATTACCCAT TCGCGGTGCT GATGGAATAC TGTTGACCTT TGCTAACTGT
TGTCGCCCTA TTCCTGGTGA TCATATCATT GCTCATGTTA GTCCTGGTCG TGGTCTTGTC
GTTCATATGG AAGACTGTGC CAATGTTCGT GGTTATCAAA AAGAATTAGA TAAATACATG
GGCGTTGAAT GGGCGGACGA ATTTGATCAA GAATTTGCAA CCGCTCTAGA TATTGATCTG
CAAAACCATC AAGGTGCGCT GGCCAATTTA ACCAATGTTG TCGCGAGTAC GGGATCGAAT
ATCCGTGGTA TTTCTACCGA AGAAAAAGAT GGCCGATTGT ATACAGTCAC CATCGAATTA
ACGGCGAAAG ATCGCACACA TTTAGCGGAA ATAATGCGTC GCATTCGAGT CATGCCGCAC
GCATTGAAAG TTCGTAGACA TAAGAACTAG
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| Protein sequence | MDLFDSLKDV AKDYLPEPHI EALRRSYLVA KEAHEGQTRS TGEPYIIHPV AVARILAEMR
LDHKTLMAAL LHDVIEDTQV SKEELAEQFG DTVAELVDGV SKLDKLKFRD KKEAQAENFR
KMVMAMVQDI RVILIKLADR THNMRTLGAL RPDKRRRIAR ETLEIFSPLA HRLGIHNIKT
ELEELGFEAL YPNRYRVLKE VVKSARGNRK EMIQKIHAEI EGRIAEAGIK GRVVGREKNL
FAIYHKMKNK EQRFHTIMDI YAFRVITDDV DTCYRALGQV HSIYKPRPGR IKDYIAVPKA
NGYQSLHTSM VGPHGVPVEV QIRTEDMEQM ANKGVAAHWS YKEGDNSSST TAQIRAQRWM
QSLLELQQSA GSSFEFIENV KSDLFPNEIY VFTPKGRIFE LPVGATAVDF AYAVHSDVGN
SCVGSRVNRQ PYPLSKPLKS GQTVEIISAP GARPNAAWLN YVVTSKARTK IRQVLKTMRK
EDSVILGRRL LNHALGHNLS LDDVSEENMT HVLSDLKLAT QDDLLAAIGL GELMSIVVAR
RLLGDADELT QQNPSNIETS TGKKLPIRGA DGILLTFANC CRPIPGDHII AHVSPGRGLV
VHMEDCANVR GYQKELDKYM GVEWADEFDQ EFATALDIDL QNHQGALANL TNVVASTGSN
IRGISTEEKD GRLYTVTIEL TAKDRTHLAE IMRRIRVMPH ALKVRRHKN
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