| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I0196 |
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| Symbol | greB |
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| ID | 6988689 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | + |
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| Start bp | 235883 |
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| End bp | 236350 |
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| Gene Length | 468 bp |
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| Protein Length | 155 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 643378581 |
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| Product | transcription elongation factor GreB |
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| Protein accession | YP_002261739 |
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| Protein GI | 209693811 |
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| COG category | [K] Transcription |
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| COG ID | [COG0782] Transcription elongation factor |
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| TIGRFAM ID | [TIGR01461] transcription elongation factor GreB |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0150098 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAACCA ATTTAATCAC ACGTGAAGGC TTTAACAAGC TACAAGATGA ACTCACGTTT
CTATGGAAGG AAGATCGCCC TGAAGTCACC AAAAAAGTGA CTTGGGCGGC GAGCTTAGGT
GATCGTAGCG AAAACGCTGA TTACCAATAC AATAAGAAAC GCCTACGCGA GATTGACCGT
CGAGTGCGCT ATTTGCGTAA GCGTTTGGAT CAAGTCAAAG TCGTTGATTA CTCCCCCCAA
CAAGATGGCA AAGTCTTTTT CGGTGCGTTC GTTGTGATTG AAAACGAACA AGGCGACACC
CTCTCTTTTC GTATTGTCGG CCCTGATGAA ATTTTTGGCC GCCATGATTA CATTTCGATT
GATTCTCCTA TGGCGCGAGC GCTGATTAAG AAGGAAGTGG ATGAAGAAGC GATTGTAAAA
ACGCCGGAGG GAGATAAAGA ATGGTTTGTG AATTCGATAA AATACTAA
|
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| Protein sequence | MKTNLITREG FNKLQDELTF LWKEDRPEVT KKVTWAASLG DRSENADYQY NKKRLREIDR
RVRYLRKRLD QVKVVDYSPQ QDGKVFFGAF VVIENEQGDT LSFRIVGPDE IFGRHDYISI
DSPMARALIK KEVDEEAIVK TPEGDKEWFV NSIKY
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