| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I0195 |
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| Symbol | htrB |
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| ID | 6989246 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | + |
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| Start bp | 234906 |
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| End bp | 235847 |
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| Gene Length | 942 bp |
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| Protein Length | 313 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 643378580 |
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| Product | lipid A biosynthesis lauroyl acyltransferase |
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| Protein accession | YP_002261738 |
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| Protein GI | 209693810 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1560] Lauroyl/myristoyl acyltransferase |
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| TIGRFAM ID | [TIGR02207] lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00262983 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATGTCTA AATATCAAGC CCCTACATTC TCTTACTCCC TTCTGCATCC TAAATATTGG
GGGGTTTGGT TTGGCTTTGG TTTATTGTTC ACCATCGTCA CTATTTTACC GTATAAAGCG
ACCTATAAAC TCGCTCGTGG GTTAGGGTTT CTAGGATTGA AAGTAAGTAC GTCTCGCGCT
CATGTCGCTC GTCGCAATCT TGAATTGGCT TTTCCTGAAA TGACCCCTTC TGAGCGCGAA
GCCATCGTTA TCGAAAACTT CAAAAACTCA GGGTTAGCAA TATTCGAGAC AGCTATGGCT
TGGGTATGGC CAGATTGGCG TATAGAAAAA CACTTTAGCT ACGAGAATGT TCAACATCTA
TTGGATTTTG AGAAAGAAAA AAAAGGCGTA TTGGTCGTTA TTGTTCACGC CCTCAACCTT
GAGTTAACTT GTCGAGCAAT GGCAGCTGTC TCTCCTGGCT ACGGCGTTTA TCGTCCTCAC
AACAACCCAG CTTATGACTT TATTCAGTAC TGGGGCCGCA CGAGTCACGG AAATCAAACC
ATCGATCGTA AAGACGTAAA AGGCATGATT CGTAAGTTAC GTAATGGCGA GCGAGTCTGT
TATTTACCAG ATCACGACTA CAATCGAAAT AAATCGGTGT TTGTGCCTTT CTTTGCTGTT
CCAGATGCGT GCACCACCAT TGGCACTGAT ATTTTAATCA GTGCGAGTCA ATGTGCGGTC
ATCACTGCAT CAGGATTTAG AACCTACAAT AATTATCATC TAAATATTGA TCATGACATC
AGCGACCAAT TGCCGAAGAA TGATCCCACT GGCGTTGCGA CAGTAATGAA CCAAGCCGTT
GAGCGTGTCA TTCTTCGTGG TATTCCTCAA TGGATGTGGC TGCATAAACG ATTTAAAACC
ATGGAAGATC CAAGCATTAA GAAAGGCATT CGTTACGATT AA
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| Protein sequence | MMSKYQAPTF SYSLLHPKYW GVWFGFGLLF TIVTILPYKA TYKLARGLGF LGLKVSTSRA
HVARRNLELA FPEMTPSERE AIVIENFKNS GLAIFETAMA WVWPDWRIEK HFSYENVQHL
LDFEKEKKGV LVVIVHALNL ELTCRAMAAV SPGYGVYRPH NNPAYDFIQY WGRTSHGNQT
IDRKDVKGMI RKLRNGERVC YLPDHDYNRN KSVFVPFFAV PDACTTIGTD ILISASQCAV
ITASGFRTYN NYHLNIDHDI SDQLPKNDPT GVATVMNQAV ERVILRGIPQ WMWLHKRFKT
MEDPSIKKGI RYD
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