| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I0192 |
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| Symbol | radC |
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| ID | 6989170 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | - |
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| Start bp | 231926 |
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| End bp | 232600 |
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| Gene Length | 675 bp |
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| Protein Length | 224 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 643378577 |
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| Product | DNA repair protein RadC |
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| Protein accession | YP_002261735 |
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| Protein GI | 209693807 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2003] DNA repair proteins |
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| TIGRFAM ID | [TIGR00608] DNA repair protein radc |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000306509 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCTTTAA TGAATCTGCC AGAGGAATCC CGTCCAAGAG AGAAATTACT CGCCCTAGGG
CCAAAGTCAT TAACCGATGC TGAGCTGTTA GCCATTTTCC TTCGCACTGG TATTAAGGGA
ATGAATGCGA TTGAGTTGGC CGATAAGCTA CTAAAAGAGT TTGGCTCTCT AAGAAAATTA
TTGGGTTCGA ATGAAAATGA ATTTTGCAGC CACAAAGGAT TAGGCACGGC AAAATTTGCC
CAGTTGCAGG CCGTTGTTGA AATGACAGAG CGATATTTAT TTGAAAAGAT AGAAAAGGAA
GATGCGCTCA CCAGTCCGGA ACACACCAAG CGTTATCTTA CGCGAATATT AAGGGACCGA
CATCGAGAAG CGTTCTATGT TCTCTTTCTT GATAACCAAC ATCGAGTACT AAAAGGGGAG
GTGTTATTTG AAGGTACAAT TGATGCCGCT GCGGTCTATC CAAGAGAAGT TGTAAAAAGA
TCGATAGATT ATAATGCAGC CGCCATCATT TTAGCGCATA ATCACCCATC TGGTGTCGCA
GAGCCAAGTC AAGCTGACAG AAGGATAACA AAACGTATCT CAGATGCAGT TGAATTGGTG
GATATCCGAG TCCTCGATCA TTTCGTGATT GGCGATGGAG AAATAGTCTC TTTTGCCGAA
AGAGGATGGA TTTGA
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| Protein sequence | MSLMNLPEES RPREKLLALG PKSLTDAELL AIFLRTGIKG MNAIELADKL LKEFGSLRKL
LGSNENEFCS HKGLGTAKFA QLQAVVEMTE RYLFEKIEKE DALTSPEHTK RYLTRILRDR
HREAFYVLFL DNQHRVLKGE VLFEGTIDAA AVYPREVVKR SIDYNAAAII LAHNHPSGVA
EPSQADRRIT KRISDAVELV DIRVLDHFVI GDGEIVSFAE RGWI
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