| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I0176 |
|---|
| Symbol | wavT |
|---|
| ID | 6989411 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Aliivibrio salmonicida LFI1238 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011312 |
|---|
| Strand | - |
|---|
| Start bp | 216890 |
|---|
| End bp | 217729 |
|---|
| Gene Length | 840 bp |
|---|
| Protein Length | 279 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 643378562 |
|---|
| Product | putative glycosyl transferase |
|---|
| Protein accession | YP_002261720 |
|---|
| Protein GI | 209693792 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1215] Glycosyltransferases, probably involved in cell wall biogenesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTAAAAC CAAAAGCCTC TTTAATTATT GCATTTTATA ACAATACAGT ATGCTTAGAG
TTAATATTTA AAGCCTTATC TACTCAAACG GAATCCAATT TTGAAGTGAT TATCGCGGAT
GATGGTTCAA AGCAAGAAGC TATTGATTTC ATTAATACCC GTAAAGAATC CTTACCTTTT
ACCGTTAAGC ATGTGTGGCA TGAAGATAAA GGTTTTAGAA AGAATCGTAT CCTTAATCAT
GCAGTGCTCA AATCCAGTAG TGATTACTTG ATCATTATTG ATGGTGATTG TATCCCAGAA
AAGCACTTTA TTGAGGATCA CTTTAATAAT GCAGAAAAAG GGCGTAGCTT AAGTGGTCGT
CGAGTTGAAC TCCCAGAGCT GTATACTCAA CGAGTTATGA ATAGCGTATC TCCAGGAGCA
TTTTTTAGTG AAAATAAGCT AGAAATTTTA ATACGGTACA TGTTATCTAA TGGAGATAAA
CAAACAAAAG GTCGCCATAT TGAAAAAGGC CTTAGATTTG CTAAGCTGTG GCAACAATCT
CTGTTTAAAG GAAAGAAAGC CAAAGCGATT TTAGGTTGTA ACTTCTCATT ATTTAAAGAA
GATTTATTAA AAATAAACGG CTTTGATATG AGATATGAAG CGCCAGCAGT AGGTGAAGAC
AGTGATGTTG ACTATCGACT AAACTTAGTC GGTGTTACCA ATAAATCTCT CAATGGACTT
GCCGTACAAA TCCATTTGTA CCATCCATGG TTAGATAGAG TTTCGGGTAA TTGGGATATT
CTCAGAGATA CCATGAAGCA TGAGAGGTAT TGGGCTGATA GTGGTATTAA TGATTGTTAA
|
|---|
| Protein sequence | MLKPKASLII AFYNNTVCLE LIFKALSTQT ESNFEVIIAD DGSKQEAIDF INTRKESLPF
TVKHVWHEDK GFRKNRILNH AVLKSSSDYL IIIDGDCIPE KHFIEDHFNN AEKGRSLSGR
RVELPELYTQ RVMNSVSPGA FFSENKLEIL IRYMLSNGDK QTKGRHIEKG LRFAKLWQQS
LFKGKKAKAI LGCNFSLFKE DLLKINGFDM RYEAPAVGED SDVDYRLNLV GVTNKSLNGL
AVQIHLYHPW LDRVSGNWDI LRDTMKHERY WADSGINDC
|
|---|
| |