| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I0159 |
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| Symbol | rfaD |
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| ID | 6988868 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | + |
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| Start bp | 198490 |
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| End bp | 199431 |
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| Gene Length | 942 bp |
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| Protein Length | 313 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 643378547 |
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| Product | ADP-L-glycero-D-mannoheptose-6-epimerase |
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| Protein accession | YP_002261705 |
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| Protein GI | 209693777 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | [TIGR02197] ADP-L-glycero-D-manno-heptose-6-epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCATTG TAACTGGCGG CGCTGGCATG ATTGGCAGCA ACATTATTAA GTCTTTAAAT
GACAACGGCT TTAACGATAT CTTAGTGGTT GATAACCTGA AAGATGGCAA AAAATTCAAG
AACCTAGTTG ATCTTGATAT CACTGATTAC ATGGATAAAG AAGATTTCAT TACGCAAATC
ATGGCGGGTG ATGACTTTGG TACAATTGAT GCTATTTTCC ACGAAGGTGC GTGCTCTGCT
ACCACTGAGT GGGATGGCAA ATACATGATG ATGAACAACT ATGAATACTC GAAAGAAGTG
CTTCATTTTT GTATCGAACG TGAGATCCCA TTCTTATACG CATCATCTGC TGCGACTTAT
GGCGATACTG ATACCTTCAT TGAAGAGCGT GAGTACGAAG GTGCATTAAA CGTTTACGGC
TATTCTAAAC AACAGTTTGA TAACTACGTT CGCCGCCTAT GGGCTGATGC TGAAGCGCAC
GGTGAAACGG TTTCTCAAAT TACCGGTTTC CGTTACTTCA ATGTCTATGG TCCTCGTGAG
CAACATAAAG GTTCTATGGC TTCGGTTGCT TTCCATCTGA ACAATCAAAT GAATGCCAGC
GAAGATCCTA AACTGTTTGA GCGCAGTGAT GAATTCAAGC GTGATTTCGT TTACGTGGGT
GATGTGGCTG CGGTTAACTT GTGGTTCTTA GAAAATGGCG TATCAGGTAT TTTCAACTGT
GGTACTGGTC GTGCTGAACC GTTCCGCGCT GTTGCGGATG CGGTAATTAA GCACCACGGT
AAAGGCGAAG TTCAAAGCAT TCCGTTCCCT GAGCATTTAA AAGGCGCATA TCAAGAGTTT
ACGCAAGCAG ATTTAACTAA GTTGCGAGCT GCGGGTTGTG ATGTTGAGTT TAAGTCGGTA
GCTGATGGTG TTGCTGAGTA TATGGCGATT GTTAATAAGT AA
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| Protein sequence | MIIVTGGAGM IGSNIIKSLN DNGFNDILVV DNLKDGKKFK NLVDLDITDY MDKEDFITQI
MAGDDFGTID AIFHEGACSA TTEWDGKYMM MNNYEYSKEV LHFCIEREIP FLYASSAATY
GDTDTFIEER EYEGALNVYG YSKQQFDNYV RRLWADAEAH GETVSQITGF RYFNVYGPRE
QHKGSMASVA FHLNNQMNAS EDPKLFERSD EFKRDFVYVG DVAAVNLWFL ENGVSGIFNC
GTGRAEPFRA VADAVIKHHG KGEVQSIPFP EHLKGAYQEF TQADLTKLRA AGCDVEFKSV
ADGVAEYMAI VNK
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