| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I0147 |
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| Symbol | trxA |
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| ID | 6989092 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | + |
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| Start bp | 186733 |
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| End bp | 187059 |
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| Gene Length | 327 bp |
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| Protein Length | 108 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 643378538 |
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| Product | thioredoxin 1 |
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| Protein accession | YP_002261696 |
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| Protein GI | 209693768 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG3118] Thioredoxin domain-containing protein |
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| TIGRFAM ID | [TIGR01068] thioredoxin |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000169587 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGCGACA AAATTTTGCA GCTTACAGAT GACGGTTTTG AAGAAAGTGT TATCAATGCT
TCAGGCCCAG TACTAGTAGA TTTCTGGGCA GAATGGTGTG GTCCTTGTAA AATGATTGCT
CCCATTCTGG ATGAGATTGC AGATGAGTAC GAAGGCAAAT TAACGATTGG TAAATTAAAT
ATCGATCAGA ATGCAGGAAC ACCGCCAAAA TTCGGTATCC GTGGCATTCC AACGCTGCTT
TTATTTAAAG ATGGTGGCGT AGCTGCAACG AAAGTGGGTG CACTTTCTAA AACTCAACTT
AAAGAGTTTC TTGATGCAAA CCTATAA
|
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| Protein sequence | MSDKILQLTD DGFEESVINA SGPVLVDFWA EWCGPCKMIA PILDEIADEY EGKLTIGKLN
IDQNAGTPPK FGIRGIPTLL LFKDGGVAAT KVGALSKTQL KEFLDANL
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