Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I0141 |
Symbol | fepC |
ID | 6988490 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | + |
Start bp | 180647 |
End bp | 181453 |
Gene Length | 807 bp |
Protein Length | 268 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 643378533 |
Product | iron-siderophore ABC transporter, ATP-binding protein |
Protein accession | YP_002261691 |
Protein GI | 209693763 |
COG category | [H] Coenzyme transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG1120] ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAAACA ATAACGAAAT AACCAAAACA TTATCGGCTC ATCACGTTTC ATTAAGCTAC AGTGAAGGGC AAATAATCAA CCGCATGCAA CTGGCTATTC CAGCTAAAAA ACTGACAGTG ATTCTTGGTC CAAACGGCTG TGGAAAATCG AGCTTACTCA AAATGTTAAG TCGCATAAAA CACCCCGATG AAGGGTGCAT TCTTTTAGGT GAAGAGAACA TTTTAAAAAT GAACAGTAAG ACACTCGCGC GTCAACTTGC TCTATTAGTT CAAAAGCCCG AATTACCTGA GGGGATAGAG GTTATCGAAC TCGTCAGCCG CGGGCGTTAC CCACACCAAA AAATGTGGCA GCAATGGTCG CTAGATGATG AAACCGCCGT TCAAGAAGCG TTGATCGCCA CAGGGTTAAC CGAGTTAATA CACCGTCCTG TTGCCAGCTT ATCTGGCGGA CAACAACAGC AAGTTTGGTT AGCAATGGTA CTCGCTCAAA AGAGTAATAT CTTAATGCTT GATGAACCAA CCTCTTTTCT TGATATACGT GCGCAACTTT TAGTGATGAA TTTTTGTCTG TCTCTACGAG ATCAAGGAAA AACATTGGTG ATGGTGCTGC ATGATATTAA TCAGGCCTTT AGATACGCCG ACAATATCAT CATGATGCAC AAGGGGAAAA TAGTGGCGGA AGGAAAACCT GAAGACCTCG CGAACCCCGA CATTATTCAC ACGATCTATG GGGTAAACAC CACCATTATC ACCGATCCAG AATCTCAAAC CCCCATGATT ATCCCCAAAA AAGATCCTTC TATCTAA
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Protein sequence | MQNNNEITKT LSAHHVSLSY SEGQIINRMQ LAIPAKKLTV ILGPNGCGKS SLLKMLSRIK HPDEGCILLG EENILKMNSK TLARQLALLV QKPELPEGIE VIELVSRGRY PHQKMWQQWS LDDETAVQEA LIATGLTELI HRPVASLSGG QQQQVWLAMV LAQKSNILML DEPTSFLDIR AQLLVMNFCL SLRDQGKTLV MVLHDINQAF RYADNIIMMH KGKIVAEGKP EDLANPDIIH TIYGVNTTII TDPESQTPMI IPKKDPSI
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