| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I0137 |
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| Symbol | |
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| ID | 6988731 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | + |
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| Start bp | 175286 |
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| End bp | 177451 |
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| Gene Length | 2166 bp |
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| Protein Length | 721 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 643378529 |
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| Product | TonB-dependent iron-siderophore receptor precursor |
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| Protein accession | YP_002261687 |
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| Protein GI | 209693759 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4773] Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACATTGA ATACGAACAT GACATCACCA AAAATACCGA CATACTCACT TTTCTATGGG
TTATCTTGTG TTTTAACGTT GCCAGTAATG GCAGAGGACA ATGATAACGA GGCAATGGAA
GTAATGACCA TTACCGCGCA TAAACAAGAG ATTGCCAGCT ATAAAACAGG TGAAACCTCA
ACCTCAACAG GGATGGATTT ATCCTATTTA GAAACACCAC AATCTGTAAC TGCCGTGAAC
GAACAAGCCA TGAAAGATCA ACAACTAAAC AGTGTTGTTG ATGTAATGAA CAGCGTATCG
AGTGTTTACG CTCGACCTAT GGACAACGAC AGATACACCG TCTCTGCTCG TGGTATGGAA
GTAAGCACCA TTCTTTATGA TGGCGTTCCT ATCACCTATG ACACCCGTTT CAATTACGGT
GATAACCTAA TGGATACGGC GATTTATGAT CGCGTTGAAG TGGTTCGCGG TGCGAACGGA
TTAATGATTG GTGCAGGCGA GCCTTCAGCC TCTATCAACC TTATTAGAAA ACGTCCTACT
CACGATTTTA ATGCCAATGT TAGCGTAGGC ACGGGATCTT GGAATTTAAA ACGTGGGGTC
GTTGATATCT CTGGCAGCGT AAATACTGAT GAAAGTATTA GAGCTCGTCT TGTTGCTGTC
CATCAAGAAC GTGACTCCTA CTTAGACAGA TACGAACAGA AAAGAAGTAC ATTATATGGC
GTTATTGAGG CCGATTTAAC CACCGACACC TTATTAACGG TCGGTACCGA TTATCAATAT
AACGAGCCAA AAGGCACCAT GGCGGGAGGA CTTCCCCTCT TTCATAGCGA TGGTACGAGA
ACAAATTACA GCACATCAGC AACCACCGCT CCTGACTGGG CATCCGCTGA AACCACAGCA
TTAAATTCAT TTGTCAGTCT AGAGCATAGC TTTAACCCAG ATTGGGTAAT AAAAGGAACG
TATACCTATG GTGATAACAG CTTAGATTTC AATTATTTAT GGCCGAAAGG TTTTCCTGAC
CCAAATACAA ATGAAGGTAT GGTTCCAGGC AGTATTAATT ATATTGATGG AAATCGAAAA
ATTAATAATC TTAACCTAAC TCTCAAAGGT CATTTTTCTC TGTTTGGACA AGATCACCAA
ATGATCGCGG GTTTCAACAA TCAAAAAATG ACGTTCGAGA ATACTTACTA TAAAGGGCTA
AACGCACAAT CAGAGGTCGG TGATTTTACT GACCCAAATT GGTCTTATCC AGAACCGGAA
TGGAGCAGAG AAAAAAGCTG GGAATCAACA GGAGAAACCA AACAACAAGG GATCTATGTC
GCCTCACATA TCAATGTAAC TGACCAGTGG TCTTTCGTTC TTGGTGGACG ATTGAGTGAC
TGGGAAACCG ATATGAATGA CTTTGGAACC CTTCATAAAA ATAAAATCAG TAATGAATTT
ACCTCATACG TTGGGACGAC TTATGCAATA ACCCCCATTG TTGCGGTATA CGCCAGTTAC
TCTGATATTT TCACACCGCA AAACGTAAAA GGTAAAAATA ATACGTATCT CGACCCGATT
AAAGGAAAGA ACTATGAAAC AGGAATTAAA GCAAGCCTCT TGGATGATCA GTTAAACCTT
TCTCTTAATG GCTTCAACAC GTTACAGGAT AATTTAGGAA TAAAAACTGG CGACGTCGAT
CCAAATACAG GGATGCCTAT TTATCGTGGT GTTGATGGTA CAGAAACCAA AGGGTTCGAG
TTTGAAACCA ATGGTGCCAT CACAGATGAC TGGAACTTAA CGCTTGGCTA TACCTATTTC
AAAATAGAAG ATCCACAAGG AAATAGATTA AAAACAGACA TCCCTAACAA ACAACTCAAA
CTCTTCACCA CTTATGAATT AGGTGACGTT TTAGAGGGCC TCCAAATTGG CGGAGGGGCT
CGTTGGTACA GCAGTATTTA TAAAGAAGTA AGCGGTATAC CTAATGTTGG AGATACCAAA
GTAAAACAAG ACAGTTACGC GATATACGAT GTAATGGTGC GATATGAGGT AAACAAAAAA
CTTAACGTCA ATGCAAATGT TAAAAACCTT TTTGATAAAG AATATTACAG CCAGATGGGG
ATCTATAACC AATATCACGC TGGCGAGCCT CGTAATATAA GCGTGAATGT TGACTACCAA
TTTTAA
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| Protein sequence | MTLNTNMTSP KIPTYSLFYG LSCVLTLPVM AEDNDNEAME VMTITAHKQE IASYKTGETS
TSTGMDLSYL ETPQSVTAVN EQAMKDQQLN SVVDVMNSVS SVYARPMDND RYTVSARGME
VSTILYDGVP ITYDTRFNYG DNLMDTAIYD RVEVVRGANG LMIGAGEPSA SINLIRKRPT
HDFNANVSVG TGSWNLKRGV VDISGSVNTD ESIRARLVAV HQERDSYLDR YEQKRSTLYG
VIEADLTTDT LLTVGTDYQY NEPKGTMAGG LPLFHSDGTR TNYSTSATTA PDWASAETTA
LNSFVSLEHS FNPDWVIKGT YTYGDNSLDF NYLWPKGFPD PNTNEGMVPG SINYIDGNRK
INNLNLTLKG HFSLFGQDHQ MIAGFNNQKM TFENTYYKGL NAQSEVGDFT DPNWSYPEPE
WSREKSWEST GETKQQGIYV ASHINVTDQW SFVLGGRLSD WETDMNDFGT LHKNKISNEF
TSYVGTTYAI TPIVAVYASY SDIFTPQNVK GKNNTYLDPI KGKNYETGIK ASLLDDQLNL
SLNGFNTLQD NLGIKTGDVD PNTGMPIYRG VDGTETKGFE FETNGAITDD WNLTLGYTYF
KIEDPQGNRL KTDIPNKQLK LFTTYELGDV LEGLQIGGGA RWYSSIYKEV SGIPNVGDTK
VKQDSYAIYD VMVRYEVNKK LNVNANVKNL FDKEYYSQMG IYNQYHAGEP RNISVNVDYQ
F
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