| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I0136 |
|---|
| Symbol | iucC |
|---|
| ID | 6988732 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Aliivibrio salmonicida LFI1238 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011312 |
|---|
| Strand | + |
|---|
| Start bp | 172803 |
|---|
| End bp | 175262 |
|---|
| Gene Length | 2460 bp |
|---|
| Protein Length | 819 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 643378528 |
|---|
| Product | siderophore biosynthesis protein |
|---|
| Protein accession | YP_002261686 |
|---|
| Protein GI | 209693758 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG4264] Siderophore synthetase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACAGATT TCACAGCCAA AGCTCAATGT AGCTTTACGG ATCGTTACGC GCCAAAAAAA
GACCAATTAA TCAATATCTC TGAATTTGAG TTCAGAAATT ACAACGAAGA CACCGATTTT
AGCGTTATTA ATCAATGGTT ATCTCAGAGT TATTCATCGT ATTGGGGAAT GAATGAACTT
ACCGAAGATC AGCGCAACCT TGAGCTAAAA AACACAGCCC ATAAATTTGG ACTGGTGGGA
CTAAAACGCG GAAAAATACT GTTTTATACC GAGCTATATC ATCCAGCGAA AGACGAAATA
GGTGAGCATT ACCCAGTTCA AGAAGGTGAC TGTGGCATGC ACTTGATTAT CGCTCCCGTT
GATATTCCAG AGCATCGTTT AAGTCAAAAC GTCATTACCG CAATCTCGTC ATTAATTTTA
GAACACCTGC CTTTTACAAG GCTCGTTGTT GAACCGGATA TCCAAAATGA GAAAGTACAC
CGTTTAAACC ACTTAATAGG TATTGAGTAC AGTCAAATCG TTCCGCTTAA CAGCAAAACC
GCAAAATTAG GGTTTGCTAC TAAGTCACAA TTTTTGCAGT CACAAGGGAA AGTATCTTCA
ATGAAAAATA GCAGTAAGAA TCCATCATTA TCACTCGCCA CTTCTCATTT AACGACAGAG
TATTGGCATA AAGCGAATCA ACATTTAATC GCGAAAATGA TCACCGAGTT GAGCCATGAG
CAAATCATCA CACCGATAAA ATTAGATGAT GCATCAAATG CACAAGCCGC CTCTTGGTGT
ATCACCTTCA ACTCGGATAC GGGAACGTCT GAATACCTCT TTCGTGCACG CCAATATCAA
CTCGATCATT TATTTGTTGA ACCACAATCA ATCACTTGCA CTAAAGATGA TAAAAACCAA
CCTCTTGATG CCGTCTCTTT TATTCTTTCT TGTCGTCACC TTCTTGAGAT CAGTGATGCA
TTGTTACCTA CGTATTTAGA GGAAATCACT AGCACGCTAT ACAGCAAAGC CTATAAGCTC
ATGCACCAAA ATAAGACCTC AGCTCAATTA GCGAATGCAA GCTACCAAGA GATTGAAGCT
GCCATGACAG AAGGTCATCC AGTATTCATT GCTAATAACG GCAGAATTGG CTTTGATATG
TTAGATCATG TTGAATTTTC ACCAGAAAGT GGACAATCAT TAAATTTACA ATGGATTGCA
GTGCTGCGTG AAAAAACAAG CTTTGCCGTC ATCGAATCAT TAAGCTACGA CCGCCTAATT
TTTGATGAAT TAGGTCAATC ACAACTGAAT GAGTTCAATC AACAACTCTC TATGCAAGGG
CTTGAACCAT CACATTATTA CTTAATGCCC ATCCACCCAT GGCAATGGCG AGAAAAAATA
TCACGTATCT TCGCCGCTGA TATCGCCAAT CAGTATGTAG TTCCTCTTGG CACGACGGAA
GATAAGTATC AAGCACAGCA ATCTATTCGA ACCTTTTTTA ACCTTTCTTC ACCAGAAAAG
TGCTATGTGA AAACCGCCTT ATCGATTTTA AATATGGGCT TCATGCGTGG GTTATCTCCG
TATTACATGA GCCGAACACC GGCTATCAAT ACGTTCATTG CAAACCTCAT TGAAACCGAT
CCCTACTTTG CTAAAAAGCA ATTTTTTGTT CTTAAAGAAG TCGCGGCAAT AGGCTATCAC
CACAGCTACT ATGAGCAAGC TACTCGCACT GACAATCCTT ATAAAAAAAT GCTTTCTTCT
TTATGGCGTG AAAGTCCATA CGCACCAGAT CAACATGGCA ATGTATTGGT AAACAAGCAG
CAAAAACTAC TGACAATGGC TTCATTACTG CATGTTGATG ACCAAGGAAA AAGCCTGATA
TCAGCGTTAA TGGCCGATTC GCCGTTGTCT GATCATAACT GGCTTAAGCA GTACATGGAT
CTTTATCTAC AACCTCTTCT GCACAGCTTT TTTGCTTATG ATCTTGTCTT TATGCCACAC
GGTGAAAACT TAATTTTAGT ACTTGAAGAC AACAGCCCAA TCAAAATAAT CATGAAAGAC
ATCGGGGAAG AAGTGGCCAT TTTAAATGGA GAAAAAACTC TACCAAATGA CATGAATTGC
TTGGCAGTTG ATCTTGAAGA CCCAATGAAA CTTAACTACA TTTTGCTCGA TATTTTTGAT
TGTATTTTCC GATTCATCGC TCCATTGCTT GAGCAACAAA CTCAGGTTAG CGAATCTGAT
TTTTGGGAGA TAGTTGCCGA TTCAGTCAAA GACTACCAAC AAGAACACCC GCAATTTGAT
GCGAAATATC AACGTTACGA TCTGTATTGC AGCTCGTTCG CCCGTACCTG CCTAAATCGA
ATTCAACTAA ACAATAATCA GCAAATGATT GACCTTGAAG ATAGAGAAAA GAACTTACGT
TTTGCTGAGG ATATTGCAAA CCCTCTCGCT CTATTTGCTA AGACTCATCG CATTATTTAG
|
|---|
| Protein sequence | MTDFTAKAQC SFTDRYAPKK DQLINISEFE FRNYNEDTDF SVINQWLSQS YSSYWGMNEL
TEDQRNLELK NTAHKFGLVG LKRGKILFYT ELYHPAKDEI GEHYPVQEGD CGMHLIIAPV
DIPEHRLSQN VITAISSLIL EHLPFTRLVV EPDIQNEKVH RLNHLIGIEY SQIVPLNSKT
AKLGFATKSQ FLQSQGKVSS MKNSSKNPSL SLATSHLTTE YWHKANQHLI AKMITELSHE
QIITPIKLDD ASNAQAASWC ITFNSDTGTS EYLFRARQYQ LDHLFVEPQS ITCTKDDKNQ
PLDAVSFILS CRHLLEISDA LLPTYLEEIT STLYSKAYKL MHQNKTSAQL ANASYQEIEA
AMTEGHPVFI ANNGRIGFDM LDHVEFSPES GQSLNLQWIA VLREKTSFAV IESLSYDRLI
FDELGQSQLN EFNQQLSMQG LEPSHYYLMP IHPWQWREKI SRIFAADIAN QYVVPLGTTE
DKYQAQQSIR TFFNLSSPEK CYVKTALSIL NMGFMRGLSP YYMSRTPAIN TFIANLIETD
PYFAKKQFFV LKEVAAIGYH HSYYEQATRT DNPYKKMLSS LWRESPYAPD QHGNVLVNKQ
QKLLTMASLL HVDDQGKSLI SALMADSPLS DHNWLKQYMD LYLQPLLHSF FAYDLVFMPH
GENLILVLED NSPIKIIMKD IGEEVAILNG EKTLPNDMNC LAVDLEDPMK LNYILLDIFD
CIFRFIAPLL EQQTQVSESD FWEIVADSVK DYQQEHPQFD AKYQRYDLYC SSFARTCLNR
IQLNNNQQMI DLEDREKNLR FAEDIANPLA LFAKTHRII
|
|---|
| |