Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I0133 |
Symbol | |
ID | 6986340 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | + |
Start bp | 167877 |
End bp | 169328 |
Gene Length | 1452 bp |
Protein Length | 483 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 643378525 |
Product | hypothetical protein |
Protein accession | YP_002261683 |
Protein GI | 209693755 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATAGGCG CCTTACTTCC ATTAAATGTA AATGCCAACT CATGCAAAAT CGAAGGTTAC ACCATCGGCT TTTTTAATGG GGTTGCGACG ACGAAGAAAG ATGCTGAACG TGGGCGAGAT AAAATCAAAT CTACTCTTGA TATCACTCAA TACAACGGTG AAAAAGTGGA GTACCAACTT TTCTATAACG ATTCTTACAT TGAAAGTAAT GGCTTTAACG TACTGGCTGA TTTCGCCGAA ACCTTTGACC AAAGAACTCA AGAGCTAGAG CAAAAACAAT TTGACCGATG GGAAGCGTTT TGGGATATCG TTAACGGCAA GCAAGATAGC TCTATCATCA AAAAAATCAG TGCTGCATTT TCTTGGTTTG GGGGGTTTTT TACTGACTTC AACAGTCAAC GTTCCAATAT CATCATCCGC GAATTTCTAG AATTATTAAC CCTATCGGTT GATTCTCCAG ATACAGCAAA GACTCAGATG CAGCATAAGC TCATCAATGA TTCCAATACA TGGCAAGGGA AAAAGCTGAT TTATATTGCC CATTCTCAAG GAAACTTATG GGTAAATAAA TCGTACAACT ATGTTGTGTC TCAATTAGGT TATGATGCAA GTAATATTCA TGTCGTTCAT ATCGCGCCAG CCTCTCCAAC ATTAAGTCCT AATAGCGATT ACATTTTATC TAGCTCAGAC CTTGTCATTA ACGGATTAAA TTTTACAGGG GTGGGCTCAG TGCCTCCATT TAACACAATA ATTGCACCTA GTTCTTCTGA CATTGCAGGA CATGGTTTAA TTGAGGTTTA TTTAACTCAC CCTAAATCGA TACAAAAAAT AAAATCCGCT ACGGATAAAG CATTCGCATC ACTCACCAAA CCAGACATGG AGGATGTACT GTTTTCAATT GATTATAATT ACACCCCCAC TTTTTCTGAA AGCCATGCTT CACCAGAAAT TGAATTTGTT GATAATAATA ACAATTGGGT AAAGAGAACG GACATTTATT CAGAGATCTC TTACTTACAA AGAGCAGATC CAAACGAAAA TAAATATGAG CTGAATCCCG CCAAAGATTT TGAACCACTT TCATTCATAC ATAATAAGAA GGACAGAGAG AGTCAAGTAA TAAGCATAGA TCAATGCTCT GACATACCAA ACAATGACCC CTTCATATTG GGAGAGCAAT CTAACGAAAC CATAAGATAC GCATGGGATA AGGTGCCACC AAATACGAAG GTATCGGTTA CGGTCAGAGA TAGATATGGT GTGAAGTTAC AAAATGACGA AGTATCTATC AATGAACTTC GTCCTAGAGG ACATACTTAT CAGGGGATTT TTATTGATCT AAACGCAATT AACCCTTACA CAAAAGAAGA AAAAGCATTT ATAAAACAAC AAAAGCTAGA GACTAAATAC GAACTTTATT CAGACTCAAT TCTATTTTCT ATCTCATCTT AA
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Protein sequence | MIGALLPLNV NANSCKIEGY TIGFFNGVAT TKKDAERGRD KIKSTLDITQ YNGEKVEYQL FYNDSYIESN GFNVLADFAE TFDQRTQELE QKQFDRWEAF WDIVNGKQDS SIIKKISAAF SWFGGFFTDF NSQRSNIIIR EFLELLTLSV DSPDTAKTQM QHKLINDSNT WQGKKLIYIA HSQGNLWVNK SYNYVVSQLG YDASNIHVVH IAPASPTLSP NSDYILSSSD LVINGLNFTG VGSVPPFNTI IAPSSSDIAG HGLIEVYLTH PKSIQKIKSA TDKAFASLTK PDMEDVLFSI DYNYTPTFSE SHASPEIEFV DNNNNWVKRT DIYSEISYLQ RADPNENKYE LNPAKDFEPL SFIHNKKDRE SQVISIDQCS DIPNNDPFIL GEQSNETIRY AWDKVPPNTK VSVTVRDRYG VKLQNDEVSI NELRPRGHTY QGIFIDLNAI NPYTKEEKAF IKQQKLETKY ELYSDSILFS ISS
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