Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I0128 |
Symbol | xerC |
ID | 6986336 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | + |
Start bp | 163970 |
End bp | 164881 |
Gene Length | 912 bp |
Protein Length | 303 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 643378521 |
Product | site-specific tyrosine recombinase XerC |
Protein accession | YP_002261679 |
Protein GI | 209693751 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4973] Site-specific recombinase XerC |
TIGRFAM ID | [TIGR02224] tyrosine recombinase XerC |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.742386 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGTGAAT CATTACCTCC GCAATATGAA AAACACCTAA CTGCATTTTA CGAGTTCTTG CGTAATGAAA AGGGATTGAG TATTTATACT CAACGTAACT ATAAGCGCCA GTTAACAACC ATTGCTGAGC AGTTAATTGA GCTTGGTGTT GATTCTTGGC AAGACGTTGA TGCTGGGTGG GTTCGACAAA TCACTAGTAA AGGCATGCGT TCGGGATTGA AAGCGAGCAG CTTATCGACT CGACTGTCTT CATTACGCAG TTTTTTTGAT TTCTTAGTCT TACGTAATGT ATTGCAAGCA AACCCCGCGA AAGGTGTTTC TGCGCCTCGT AAATCTCGAC CATTACCAAA AAATATTGAT GTGGATGAGA TGGGGCAGTT ACTGGAAGTG AATGAAGATG ATCCATTATC GATTCGAGAC CGAGCGATGA TGGAGCTAAT GTACGGCGCG GGTTTACGTT TGGCTGAATT AGTCGGAATT GATGTTCGAG ACATTCAATT ACGCCAAGGT GAATTACGAG TTATTGGTAA GGGGGATAAA GAGCGTAAAG TCCCTTTTTC TGGGAAAGCG AAAGAATGGT TAGGACACTG GCTGCAAGTG CGAAACCAAT TAGCGAACCC AGAAGAGAAA GGGTTGTTTG TTTCTAAATT AGGCGTTCGA ATTTCTCATC GAAATGTGCA AAAACGTATG GCTGAGTGGG GAATGAAGCA AGGGGTGAAT AGCCACATTA GTCCACACAA ACTACGTCAC TCATTTGCTA CGCATATGCT TGAATCGAGC GGTAACTTAC GTGCAGTACA AGAATTATTA GGACACGAAA ATATTTCTAC TACGCAAATC TATACCCATT TAGATTTTCA ACATCTTGCT CAAGCGTACG ATCAAGCGCA TCCAAGAGCG AAGAAAAAAT AG
|
Protein sequence | MSESLPPQYE KHLTAFYEFL RNEKGLSIYT QRNYKRQLTT IAEQLIELGV DSWQDVDAGW VRQITSKGMR SGLKASSLST RLSSLRSFFD FLVLRNVLQA NPAKGVSAPR KSRPLPKNID VDEMGQLLEV NEDDPLSIRD RAMMELMYGA GLRLAELVGI DVRDIQLRQG ELRVIGKGDK ERKVPFSGKA KEWLGHWLQV RNQLANPEEK GLFVSKLGVR ISHRNVQKRM AEWGMKQGVN SHISPHKLRH SFATHMLESS GNLRAVQELL GHENISTTQI YTHLDFQHLA QAYDQAHPRA KKK
|
| |