| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I0128 |
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| Symbol | xerC |
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| ID | 6986336 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | + |
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| Start bp | 163970 |
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| End bp | 164881 |
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| Gene Length | 912 bp |
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| Protein Length | 303 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 643378521 |
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| Product | site-specific tyrosine recombinase XerC |
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| Protein accession | YP_002261679 |
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| Protein GI | 209693751 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4973] Site-specific recombinase XerC |
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| TIGRFAM ID | [TIGR02224] tyrosine recombinase XerC |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.742386 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGTGAAT CATTACCTCC GCAATATGAA AAACACCTAA CTGCATTTTA CGAGTTCTTG
CGTAATGAAA AGGGATTGAG TATTTATACT CAACGTAACT ATAAGCGCCA GTTAACAACC
ATTGCTGAGC AGTTAATTGA GCTTGGTGTT GATTCTTGGC AAGACGTTGA TGCTGGGTGG
GTTCGACAAA TCACTAGTAA AGGCATGCGT TCGGGATTGA AAGCGAGCAG CTTATCGACT
CGACTGTCTT CATTACGCAG TTTTTTTGAT TTCTTAGTCT TACGTAATGT ATTGCAAGCA
AACCCCGCGA AAGGTGTTTC TGCGCCTCGT AAATCTCGAC CATTACCAAA AAATATTGAT
GTGGATGAGA TGGGGCAGTT ACTGGAAGTG AATGAAGATG ATCCATTATC GATTCGAGAC
CGAGCGATGA TGGAGCTAAT GTACGGCGCG GGTTTACGTT TGGCTGAATT AGTCGGAATT
GATGTTCGAG ACATTCAATT ACGCCAAGGT GAATTACGAG TTATTGGTAA GGGGGATAAA
GAGCGTAAAG TCCCTTTTTC TGGGAAAGCG AAAGAATGGT TAGGACACTG GCTGCAAGTG
CGAAACCAAT TAGCGAACCC AGAAGAGAAA GGGTTGTTTG TTTCTAAATT AGGCGTTCGA
ATTTCTCATC GAAATGTGCA AAAACGTATG GCTGAGTGGG GAATGAAGCA AGGGGTGAAT
AGCCACATTA GTCCACACAA ACTACGTCAC TCATTTGCTA CGCATATGCT TGAATCGAGC
GGTAACTTAC GTGCAGTACA AGAATTATTA GGACACGAAA ATATTTCTAC TACGCAAATC
TATACCCATT TAGATTTTCA ACATCTTGCT CAAGCGTACG ATCAAGCGCA TCCAAGAGCG
AAGAAAAAAT AG
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| Protein sequence | MSESLPPQYE KHLTAFYEFL RNEKGLSIYT QRNYKRQLTT IAEQLIELGV DSWQDVDAGW
VRQITSKGMR SGLKASSLST RLSSLRSFFD FLVLRNVLQA NPAKGVSAPR KSRPLPKNID
VDEMGQLLEV NEDDPLSIRD RAMMELMYGA GLRLAELVGI DVRDIQLRQG ELRVIGKGDK
ERKVPFSGKA KEWLGHWLQV RNQLANPEEK GLFVSKLGVR ISHRNVQKRM AEWGMKQGVN
SHISPHKLRH SFATHMLESS GNLRAVQELL GHENISTTQI YTHLDFQHLA QAYDQAHPRA
KKK
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