| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I0122 |
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| Symbol | prlC |
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| ID | 6986334 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | + |
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| Start bp | 156846 |
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| End bp | 158888 |
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| Gene Length | 2043 bp |
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| Protein Length | 680 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 643378515 |
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| Product | oligopeptidase A |
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| Protein accession | YP_002261673 |
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| Protein GI | 209693745 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0339] Zn-dependent oligopeptidases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTAATC CGTTACTTAC CTTTACTGAC TTGCCTCTTT TTTCTCAAAT TAAGCCAGAA
CACATTCAAC CTGCAGTAGA ACAAGCGATT GCAGATTGCC GAGCTAAAAT AGAAGACGTA
TTGGCGTCTG ATGCCGTACC AAGTTGGAAC AGCATTATTG TTCCCCTTGC TGAAACGGAT
GATCGTCTAA GCCGCATTTG GTCACCAGTG AGTCATTTGA ATTCAGTGCA AAACAGTGAA
GCCCTGCGTG AAGCGTATGA AGCGTGCTTA CCTATCCTTT CCGAGTACGG AACTTGGGTT
GGGCAGAACA AAGCGCTCTA TCACGCCTAT AAAGAAATCA AAGCGAGTGC CGATTTTTCT
GCACTTTCTC AAGCTCAACA AAAAACCATT ATTGATGAAT TGCGTGATTT TGAATTATCA
GGCATTGGTT TACCCGCTGA TCAACAAAAG CGTTACGGTG ATATCAGTAA GCGCACGTCA
GAATTAAGCT CAAATTTCAG CAACAATGTG CTTGATGCAA CCATGGGTTG GTCAAAGCAT
ATTACGGATG AAGCCGAATT ATCAGGGTTA CCTGAATCGG CGATGTCAGC GGCGAAAGCG
GCGGCAGAAG CAAAAGAATT AGACGGTTGG TTACTGACAT TAGAGATGCC ATCGTACATT
CCAGTCATGA CGTACAGTGA CAATAAACCA CTGCGCCGTG AAATTTACGA AGCGTTTGTG
ACTCGTGCAT CGGATCGTGG TCCAAATGCC GGTAAGTGGG ATAACACCGA TCTTATTTCA
GAAGAGCTTA ATCTTCGTCA TGAAGTCTCG CGCCTATTGG GTTTCTCTTC GTACAGTGAA
AAATCGTTAG CAACAAAAAT GGCCGAGAGC CCAACGCAAG TCCTTGGTTT TTTAAATGAC
TTAGCAGCGA AGGCTAAACC ACAAGGTGAG CGCGAAGTTG CAGAGCTAAA AGCGTTTGTA
AAAGAAGAGT TTGATATTGA TGAGTTGGAT CTATGGGATG TGACTTATTA CTCTGAAAAA
TTAAAGCAAA AGCTATATCA GATTTCAGAT GAAGAATTAC GTCCTTACTT CCCTGAATCA
AAAGCCGTCT CTGGCCTATT TGAAGTGCTA AACCGTGTGT TTGGTATGAC AGTGGTAGAG
CGTGAAGGCG TTGATGTATG GCACGAATCA GTGCGTTTCT TTGATATCTT CGATTCAACC
AACACCTTAC GTGGCAGCTT CTATTTAGAT TTATACGCGC GTGAACACAA ACGTGGTGGT
GCATGGATGG ATGAATGTCG TGTTCGTCGT TTAACTGAAA ATGGTGAACT GCAAACGCCT
GTCGCGTATT TAACGTGTAA CTTCAGTAAG CCTGTTGGTG GTAAGCCTGC ATTATTTACT
CATGATGAAG TAGTGACGTT ATTTCACGAA TTTGGTCATG GTATCCACCA CATGCTAACG
CAAATTGATG TAGCGTCAGT GTCGGGTATT AATGGTGTGC CTTGGGATGC GGTTGAGCTA
CCAAGTCAAT TCTTAGAAAA CTGGTGTTAT GAAGAAGAAG CACTCGCGTT TATTTCTGGT
CACTATGAAA CGGGTGAGCC ATTACCAAAA GAAATGTTAG ATAAAATGCT GGCGGCGAAA
AACTTCCAAT CAGCGATGTT TATTTTGCGT CAGTTAGAAT TCGGGATGTT CGATTTCACA
CTGCACACAA ATTACGATCC AGATCTAGGT GCAAAAGTAT TAGAAACCCT AGCAGAAGTA
AAAGCAAAGG TAGCGGTATT ACCTAGTGTC GAGTGGAACC GTTTTTCTCA CAGCTTTAGT
CATATTTTCG CGGGTGGTTA CGGTGCGGGT TATTACAGCT ATCTATGGGC AGAAGTATTA
TCAGCCGATG CGTTCTCGCG TTTTGAAGAA GAAGGAATTT TCAACACGGA AACAGGCCAA
AGCTTCTTGA ATAATATTCT TGAAATGGGC GGCAGTGAAG AACCTATGGA ATTGTTTAAA
CGCTTCCGTG GTCGTGAACC ACAAGTGGAT GCCATGTTAC GTCATGCGGG CATTGGTGCG
TAA
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| Protein sequence | MSNPLLTFTD LPLFSQIKPE HIQPAVEQAI ADCRAKIEDV LASDAVPSWN SIIVPLAETD
DRLSRIWSPV SHLNSVQNSE ALREAYEACL PILSEYGTWV GQNKALYHAY KEIKASADFS
ALSQAQQKTI IDELRDFELS GIGLPADQQK RYGDISKRTS ELSSNFSNNV LDATMGWSKH
ITDEAELSGL PESAMSAAKA AAEAKELDGW LLTLEMPSYI PVMTYSDNKP LRREIYEAFV
TRASDRGPNA GKWDNTDLIS EELNLRHEVS RLLGFSSYSE KSLATKMAES PTQVLGFLND
LAAKAKPQGE REVAELKAFV KEEFDIDELD LWDVTYYSEK LKQKLYQISD EELRPYFPES
KAVSGLFEVL NRVFGMTVVE REGVDVWHES VRFFDIFDST NTLRGSFYLD LYAREHKRGG
AWMDECRVRR LTENGELQTP VAYLTCNFSK PVGGKPALFT HDEVVTLFHE FGHGIHHMLT
QIDVASVSGI NGVPWDAVEL PSQFLENWCY EEEALAFISG HYETGEPLPK EMLDKMLAAK
NFQSAMFILR QLEFGMFDFT LHTNYDPDLG AKVLETLAEV KAKVAVLPSV EWNRFSHSFS
HIFAGGYGAG YYSYLWAEVL SADAFSRFEE EGIFNTETGQ SFLNNILEMG GSEEPMELFK
RFRGREPQVD AMLRHAGIGA
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