| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I0118 |
|---|
| Symbol | |
|---|
| ID | 6986331 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Aliivibrio salmonicida LFI1238 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011312 |
|---|
| Strand | - |
|---|
| Start bp | 151960 |
|---|
| End bp | 153300 |
|---|
| Gene Length | 1341 bp |
|---|
| Protein Length | 446 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 643378511 |
|---|
| Product | putative protein kinase |
|---|
| Protein accession | YP_002261669 |
|---|
| Protein GI | 209693741 |
|---|
| COG category | [K] Transcription
[L] Replication, recombination and repair
[R] General function prediction only
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0515] Serine/threonine protein kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGCAGTTAA TTACCTCACC AACTCAAATT TTCTATGATT TAATGGATCT TGATAACATT
CAAAAACAAA AAGTATTGGA TGCACTGCAA AACAGTCACC CAAATATCTA TCAAGACCTC
ATTCCATTAC TGAATAACAC CACATCAGAA CCATTCTTCG ATTTATTTGG TTTTGGTGCT
CAGCAAACTT TTAATACTGA ATGGGATTTT AGCCATCACA TGGTAGATAA ATACCAAATT
ACAAAAGAGC TGGGTCGCGG TGGGATGGGA GTAGTCTATT CAGCATATCG TGCTAATGGT
ACTTTCGAAC AAGAGCTTGC CATTAAATTT ATTCAACCTG ATTTAAAGAA TTTATTAAAC
AAACACGCCC TATTTGAAGA GGCGCAATTA TTAGCACGTT TAAATCATCC ATATATAGCA
AAAGTCTTTG ATGGTGGAGA GTACGAAGGG GCTGTTTATG TGGTGATGGA GAAAATTATC
GGTACAACAC TCAATGATTT TTTAAAGCAT AATTTGTTGT CTCGACAACA AAAATTACAA
TTATTTAGTC AGATTTGCCA AGCACTTGAA CATGCACACC AACACGATGT ACTACATGCA
GATCTAAAAC CTGAAAACAT TTTAATTGAT AAACGGAATT GCCCAAAGCT AATCGATTTT
AACTTAACTC AACAAGTAAA AAAAAATGGG CATCATAATA CTCAAGGGCT TGTCGCCTAC
AGTGAGCATT TTGCTAGCCC AGAACAAAAA GAAGGCAATT ATTTAACTCC TTTGAGTGAT
GTTTATTCTT TAGGTAAGAT TTTATTGCTT CTTTTTCCTA ATCTTCATAA GAAGGAAGAC
ATTACTTACA TCCAAGAAAA AACGACCCAA GAGACACTAT CTAAACGCTA CTGTTCTGTT
GAGGCTCTAC GCAAAGATAT CGAGTGTGTG TTGGCATCTA GGCCAATTAC ATTAAAACAA
CACACCCCTT TATATACTTT TCGTTGTTTA TTAAAACGAA AACCAATTTC CGCATTTATT
TTGGTTTTAT TAACTTTATC AACATTAATC TTATCTAGTG TATTAATCAT TAAAAACAAC
AATTTAAAAC ATGATAAAAT TGTATCAGAA AAAATAATGT TTGAGATAAC ACACTTATTG
TTTAATTCAA AAGGAAAAGA CATATCAAAG GCATCCATTA ACTCAATGCT CGAATTAACA
CGATGTAAAA TTTTATCTAA CCCTGAACTT CCAGCATACA TAAAACAAAA AATGCAACTC
GCAATGATGA TGCCAATACA AACAAAACAA AAATCATTAC CAGAAGAACA AAGAAGGGAA
ATTAAAATAC AGTTCAAGTG A
|
|---|
| Protein sequence | MQLITSPTQI FYDLMDLDNI QKQKVLDALQ NSHPNIYQDL IPLLNNTTSE PFFDLFGFGA
QQTFNTEWDF SHHMVDKYQI TKELGRGGMG VVYSAYRANG TFEQELAIKF IQPDLKNLLN
KHALFEEAQL LARLNHPYIA KVFDGGEYEG AVYVVMEKII GTTLNDFLKH NLLSRQQKLQ
LFSQICQALE HAHQHDVLHA DLKPENILID KRNCPKLIDF NLTQQVKKNG HHNTQGLVAY
SEHFASPEQK EGNYLTPLSD VYSLGKILLL LFPNLHKKED ITYIQEKTTQ ETLSKRYCSV
EALRKDIECV LASRPITLKQ HTPLYTFRCL LKRKPISAFI LVLLTLSTLI LSSVLIIKNN
NLKHDKIVSE KIMFEITHLL FNSKGKDISK ASINSMLELT RCKILSNPEL PAYIKQKMQL
AMMMPIQTKQ KSLPEEQRRE IKIQFK
|
|---|
| |