| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I0103 |
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| Symbol | |
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| ID | 6986316 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | - |
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| Start bp | 137970 |
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| End bp | 139940 |
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| Gene Length | 1971 bp |
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| Protein Length | 656 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 643378496 |
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| Product | HTH-type transcriptional regulator |
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| Protein accession | YP_002261654 |
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| Protein GI | 209693726 |
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| COG category | [G] Carbohydrate transport and metabolism
[K] Transcription |
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| COG ID | [COG3711] Transcriptional antiterminator
[COG4668] Mannitol/fructose-specific phosphotransferase system, IIA domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGATATTAT TATTAATACG CATCAATTCA CTTAACTTCG GTTCTCTTAT GATTCAATTG
CCTTATCCAC GCCTTAATAC CATATTCGAA GCACTTAGAC ATGAACCGCT TCCTCAACAA
GAACTGGCAC AGCGTTGTGA TATTTCGACT CGAACCATAC GTACTGATAT CTCTGCATTA
AACGATATTT TGGCCTCATA TGGCGCTCAA ATTCAGCATC AACGTGGAAC GGGTTATCAT
TTCGATATTT ACGATGAAGC TCGATTTTCT GATATTGAGA AACAGACTCA AAAAATGAAA
ACCTCTCCTC GTAACGCCAA AGATCGCGTT GTGTATTTAA TCATGCGCCT TCTCTCTCAA
GAGGAAGAAT GTAAGTTAGA CGATTTAGCC AATCAGTGGT TTGTTAGTCG TACCTCTTTA
CAGGCCGACA TGACAGAAAT CAGAGAGATC TTAGAGCAAT ACAATTTAGA GATAGTAAGT
AAAGCCCATC ATGGCCTGAA ACTTTTTGGG GAAGAGCAAG CGATACGAGC CTGTATCGCT
CATGTTTTAT TTCAGTTTAA ACCCAGTGAT CGCACTTTTA TTAATGTCTG TGACCACTTC
TTTCCTGAGA TTAATTTACC CTCATTAAAA GAAGATTTGC TGACGTTAAT TAATCAAAAC
CACATCCGAT TAACCGATGA AGGGTTGCAT CATTTATTGG TGTATTGCGG CATCACTCTG
CATCGAGTCA AGTTAAATTC AGTGATTCAT CACGTACATC AACCAAAAAT CAGTAATGAA
GCGCAAAACG CTGCCCTTGA TCTAAGTAAA ACGATTGAAG TATTACTTAG TGCTCCTCTT
CCTCAATCTG AAATTGATTA CTTGAGTATT CAAATTGCGG CTCGCCGAGT AACGGGGGTC
ACGATTGTCG ATACAGAAAA GCACACCGAA CAATTAGAGT TAACACATTT TTTATTAGAT
TATGTAAACG AACACTACAA TTATGATTTA CGTAATGATG AGCTATTAAA GCGTGATTTA
CTGTGCCATA TCACCACCAT GATATTGCGC GTAAAATACC AAATTACGAT ACCTAATCCG
TTAGTGGATC ATATCAAGCG CTATTATCCT TTGGCCTACG ATATGACGGT TGCGGCTATT
TCTCATTGGG GTAAACATTT GATCCCAGAT GGCGAGGTTG GTTATCTCGT GATGCATATC
GGCGTTGGCC TAGAGCGTAA CTTTGCTTTA GAAGAACAAC AGCCGCCAAA AGCACTGTTA
GTGTGTGATT CTGGCACTTC GATTATGCGG TTATTAGAAT CACAATTACT TCGCTCCCTA
CCTCAATTAG ATATTCAAAA AATTGATTCA GTAAGAGAGT ATGAATCGCT AACCAAAGTG
GATGCCGATT TTGTTATTTC TACAGAAAAA GTCTCTCAAA AAAACAGACC GACCATTACT
ATTTCGCCGT TACCAACAAG CTTTCAATTA GAGCAGGTTA ATAAACTCAT ATTAATGAAT
CGCTCCCACC CTTACATGTT GGATAAATTT TTTGATCAAC GTTATTTTTC AGTCCTATCA
GAACCAACGA CACAAGCTGA GCTGTTAAAA AAATTCACCG CACATTTCAC AGAAGACAAT
ATCACCCCTA TTGAGTTTTA TGACTCGGTG ATTGAACGTG AAAACATCAC CTCAACCATA
TTAGGTGAAG GAATTGCCAT TCCACACTCA TTGGGGCTAT TGGCTAATGA GACGAAGGTA
TACACCATTA TTTCTCCTCA TGGCATCGAT TGGGGAAACG GAAAGATTGC ACACGTGATC
TTTCTTTTTG CTATCAATAA AGACGATTAT GAAGAAGCCA TGAGCTTGTA TGATTTATTT
GTCACCTTCA TGAATGGCAA GGCGGTGGAT ACGATCTTAG AATGTTTATC GTATGAAGAA
TTTCAATACG TCGCTAAAGA GTGCTGGTTT AATAGAAGAA AAGATTGGTA G
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| Protein sequence | MILLLIRINS LNFGSLMIQL PYPRLNTIFE ALRHEPLPQQ ELAQRCDIST RTIRTDISAL
NDILASYGAQ IQHQRGTGYH FDIYDEARFS DIEKQTQKMK TSPRNAKDRV VYLIMRLLSQ
EEECKLDDLA NQWFVSRTSL QADMTEIREI LEQYNLEIVS KAHHGLKLFG EEQAIRACIA
HVLFQFKPSD RTFINVCDHF FPEINLPSLK EDLLTLINQN HIRLTDEGLH HLLVYCGITL
HRVKLNSVIH HVHQPKISNE AQNAALDLSK TIEVLLSAPL PQSEIDYLSI QIAARRVTGV
TIVDTEKHTE QLELTHFLLD YVNEHYNYDL RNDELLKRDL LCHITTMILR VKYQITIPNP
LVDHIKRYYP LAYDMTVAAI SHWGKHLIPD GEVGYLVMHI GVGLERNFAL EEQQPPKALL
VCDSGTSIMR LLESQLLRSL PQLDIQKIDS VREYESLTKV DADFVISTEK VSQKNRPTIT
ISPLPTSFQL EQVNKLILMN RSHPYMLDKF FDQRYFSVLS EPTTQAELLK KFTAHFTEDN
ITPIEFYDSV IERENITSTI LGEGIAIPHS LGLLANETKV YTIISPHGID WGNGKIAHVI
FLFAINKDDY EEAMSLYDLF VTFMNGKAVD TILECLSYEE FQYVAKECWF NRRKDW
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