| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I0075 |
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| Symbol | def |
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| ID | 6988550 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | - |
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| Start bp | 78654 |
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| End bp | 79163 |
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| Gene Length | 510 bp |
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| Protein Length | 169 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 643378438 |
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| Product | peptide deformylase |
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| Protein accession | YP_002261627 |
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| Protein GI | 209693699 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0242] N-formylmethionyl-tRNA deformylase |
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| TIGRFAM ID | [TIGR00079] peptide deformylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCGTAT TAGAAGTATT AACGTTCCCG GACGACCGTC TACGCACCGT AGCAAAACCG
GTAAAAACAG TAACACCTGA AATCCAAACA TTCATCGATG ATATGATTGA AACCATGTAT
GACGAAGAAG GCATTGGCCT TGCTGCAACG CAAGTCGATT TCCATCAACG TATCGTGGTT
ATCGATGTAT CAGAGACACG CGATGAACCA ATGGTATTAA TCAATCCTGT TATTACACAA
AAAAGTGGTG ATGACGGTAT AGAAGAAGGT TGTTTATCTG TTCCTGGCGC AAAAGGAATG
GTTCCTCGTT CTGCTGAAGT GTCAGTAACG GCATTGGATC GTGATGGAAA TGAATTTAGC
TTTGATGCTG ATGATTTACT AGCAATCTGC GTGCAACACG AATTAGATCA CCTTGAAGGT
AAATTATTCG TTGATTACTT GTCGCCATTA AAGCGCAAAC GCATCAAAGA GAAGCTAGAA
AAAATCAAAA AATTCAACGA AAAAAATTAG
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| Protein sequence | MAVLEVLTFP DDRLRTVAKP VKTVTPEIQT FIDDMIETMY DEEGIGLAAT QVDFHQRIVV
IDVSETRDEP MVLINPVITQ KSGDDGIEEG CLSVPGAKGM VPRSAEVSVT ALDRDGNEFS
FDADDLLAIC VQHELDHLEG KLFVDYLSPL KRKRIKEKLE KIKKFNEKN
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