Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I0072 |
Symbol | trkA |
ID | 6989318 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | - |
Start bp | 74902 |
End bp | 76278 |
Gene Length | 1377 bp |
Protein Length | 458 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 643378435 |
Product | potassium transporter peripheral membrane component |
Protein accession | YP_002261624 |
Protein GI | 209693696 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0569] K+ transport systems, NAD-binding component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAAATTA TAATCTTAGG TGCAGGGCAG GTTGGCGGCA CATTAGCTGA AAACTTGGTG GGCGAAAACA ACGATATTAC CGTTGTAGAT AAAAGCTCAG AGCGATTACG TGAGCTGCAA GATAAGTATG ACTTACGCGT TGTTCAAGGG TTTGCTAGCC ATCCTGATAC TTTGAGAGAA GCAGGGGCAC AAGATGCGGA CATGTTGGTT GCTGTCACCA ACTCTGACGA AACGAATATG ATCGCTTGTC AGATCGCATT TACCTTATTT AATACACCAA ACCGTATTGC TCGTATTCGT TCACCAGAAT ACTTAAAAGA AAAAGAACGT TTATTCCAAT CTGATGCAAT TCCAGTGGAT CACTTAATTG CTCCTGAAGA ATTGGTTACC GGTTATATTG AACGTTTGAT TGAATACCCA GGGGCACTGC AAGTGGCTAG CTTTGCTGAA AAGAAGGTCA GCTTAGTTGC GGTAAAAGCC TACTATGGAG GCCCATTGGT TGGTAATGCG TTATCAGCGC TTCGCGACCA CATGCCTCAC ATTGATACAC GTGTTGCAGC TATTTTCCGT CAAGGACGTC CTATTCGTCC GCAAGGAACA ACCGTTATTG AAGCGGATGA TGAAGTTTTC TTTGTTGCGG CAAGTAATCA TATTCGTTCT GTAATGAGTG AATTACAACG CCTTGAACGA CCATATAAAC GCATAATGAT CGTTGGTGGC GGTAATATTG GTGCCGGTTT AGCAAAACGT TTAGAACAGA ATTACAGCGT AAAACTGATC GAACGTAATT TAAAACGTGC AGAGCAATTA TCCGAATTAC TCGAAGAAAG TATCGTTTTT TGTGGCGACG CGGCAGATCA AGAGTTGCTC AGTGAAGAAC ACATCGACCA AGTGGATGTC TTCATCGCCG TAACCAATGA AGATGAAGCG AATATTATGT CTGCCATGCT CGCCAAGCGC ATGGGAGCCA AAAAAGTAAT GGTACTGATC CAACGCAGTG CTTACGTCGA TTTAGTTCAA GGTGGAGTGA TCGATGTTGC TATTTCTCCA CAACAAGCAA CCATCTCAGC CTTACTAACC CATGTTCGTC GTGCTGATAT CGTCAATGTA TCCTCTCTTC GTCGTGGTGC TGCAGAAGCG ATAGAAGCCA TTGCGCATGG TGACGAAACA ACCTCTAAGG TCGTCGGGAA AGAAGTACAA AATATTAAAC TTCCCCCGGG TACCACCATT GGTGCCATCG TTCGTGGCGA AGAAGTTCTC ATCGCACACG ATAAAACCGT GATAGAACAA GATGATCACG TTGTTATGTT CCTAGTGGAT AAAAAATACG TTCAGGATGT TGAACGCCTA TTCCAACCGA GCCCGTTCTT TCTGTAA
|
Protein sequence | MKIIILGAGQ VGGTLAENLV GENNDITVVD KSSERLRELQ DKYDLRVVQG FASHPDTLRE AGAQDADMLV AVTNSDETNM IACQIAFTLF NTPNRIARIR SPEYLKEKER LFQSDAIPVD HLIAPEELVT GYIERLIEYP GALQVASFAE KKVSLVAVKA YYGGPLVGNA LSALRDHMPH IDTRVAAIFR QGRPIRPQGT TVIEADDEVF FVAASNHIRS VMSELQRLER PYKRIMIVGG GNIGAGLAKR LEQNYSVKLI ERNLKRAEQL SELLEESIVF CGDAADQELL SEEHIDQVDV FIAVTNEDEA NIMSAMLAKR MGAKKVMVLI QRSAYVDLVQ GGVIDVAISP QQATISALLT HVRRADIVNV SSLRRGAAEA IEAIAHGDET TSKVVGKEVQ NIKLPPGTTI GAIVRGEEVL IAHDKTVIEQ DDHVVMFLVD KKYVQDVERL FQPSPFFL
|
| |