Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I0065 |
Symbol | |
ID | 6986291 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | + |
Start bp | 69062 |
End bp | 69418 |
Gene Length | 357 bp |
Protein Length | 118 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 643378431 |
Product | transposase |
Protein accession | YP_002261620 |
Protein GI | 209693692 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3436] Transposase and inactivated derivatives |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAAATGT TTGTCGATAT CTCAATGATT TACCTTCATA AAGCGCCCGT GGACTTTAGA AAAGGAATTA ATGGTCTTAG CATGATTGTT GAACAACAGA TGGTCATCTC TCCATTTTCT GATGCACTCT TTGTTTTTTG CAATCGACAG AATGATAAAA TAAAGGTGTT GTATTGGGAC CGGAATGGAT TTTGTCTATG GCAAAAACGC CTTGAGGAAG ATAAATTCAC CTGGCCTAAA AAAATGACCG GAGCAACCGT TTCTTTGACT GAAGAGCAAT GGCACTGGCT TCTTAACGGA CTCGACATTG ACAAAATGCA ACCTCATAAG TCTATTCACT ATCAAAGTCT AAATTAA
|
Protein sequence | MKMFVDISMI YLHKAPVDFR KGINGLSMIV EQQMVISPFS DALFVFCNRQ NDKIKVLYWD RNGFCLWQKR LEEDKFTWPK KMTGATVSLT EEQWHWLLNG LDIDKMQPHK SIHYQSLN
|
| |