| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I0039 |
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| Symbol | |
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| ID | 6986274 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | + |
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| Start bp | 41289 |
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| End bp | 42239 |
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| Gene Length | 951 bp |
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| Protein Length | 316 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 643378409 |
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| Product | transposase |
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| Protein accession | YP_002261598 |
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| Protein GI | 209693670 |
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| COG category | [S] Function unknown |
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| COG ID | [COG5464] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR01784] conserved hypothetical protein (putative transposase or invertase) |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATAAAA AAAACACATC GACACCCCAT GACGGGTTGT TTAAAGCCTT TTTAAGCAAG
CCTGATACCG CTAAAGATAT GCTGGAAACC CATTTACCAG CACATCTTCA AACGTTGTGT
GACTTATCGA CCTTGAAACT GGAGTCAGGC ACGTTTTTAG AAGACGACTT ACGTCCGTAC
TATTCAGACG TGCTCTATTC AATGAAGACA GAATGTGGTG ATGGGTACAT TTATGCGTTA
ATCGAGCACC AAAGTAGCCC AGACGAACAC ATGGCCTTTC GGATGTTCAG ATATGCTATT
GCAGCAATGC AAAAGCATCT TGACGCTGGA AACAAAGAGC TGCCATTGGT TGTTCCACTT
CTGTTTTACC ACGGTAAAAC ATCACCGTAT CCATACAGCA TGAATTGGTT GGATTGTTTT
ACTAACCCAG ACATGGCGAA AATACTCTAC AGTAATAATT TTCCATTGGT GGATGTTACT
GTGATGGATG ACAGCGAGAT AATGCAACAC AAACGAATTG CGTTATTAGA GTTGGTTCAG
AAGCACATTT ACCAAAAAGA CATCATAGAA ATAATCAAAC CGTTAGCCAT TTTACTATCA
AATGATTATC ATACAGACAG CCAAATCCGA ACCCTGATTG AATACTTAGT AACGGTAGGG
GAAAGCCAGA ACGTAAGTAC GTTGTTGGAA GAGTTGGCAC AACAAGTACC AAAACATGAG
GGCGTACTAA TGACAATAGC CGAGCAACTA ATTCAACAAG GCGAGCAAAA AGGGCTTTTA
CGAGGCGAAC AGACAGGGCT AAAAAAAGGA CTTGAAAAAG GACTTGAAAA AGGTCGCCAA
GATACATTAA ATGAAATGGC TCGTAACTTA TTGCAATCAG GTGTAGATAA AGACGTGATC
ATGAAAGCGA CAGGATTTAG CTCTCGTGAA TTAGAGCTTC TTTCGCATTA A
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| Protein sequence | MNKKNTSTPH DGLFKAFLSK PDTAKDMLET HLPAHLQTLC DLSTLKLESG TFLEDDLRPY
YSDVLYSMKT ECGDGYIYAL IEHQSSPDEH MAFRMFRYAI AAMQKHLDAG NKELPLVVPL
LFYHGKTSPY PYSMNWLDCF TNPDMAKILY SNNFPLVDVT VMDDSEIMQH KRIALLELVQ
KHIYQKDIIE IIKPLAILLS NDYHTDSQIR TLIEYLVTVG ESQNVSTLLE ELAQQVPKHE
GVLMTIAEQL IQQGEQKGLL RGEQTGLKKG LEKGLEKGRQ DTLNEMARNL LQSGVDKDVI
MKATGFSSRE LELLSH
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