| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I0031 |
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| Symbol | |
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| ID | 6986266 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | + |
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| Start bp | 33193 |
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| End bp | 35412 |
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| Gene Length | 2220 bp |
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| Protein Length | 739 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 643378403 |
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| Product | putative cell wall degradation enzyme |
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| Protein accession | YP_002261592 |
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| Protein GI | 209693664 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3409] Putative peptidoglycan-binding domain-containing protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGTAG ATGATAGAAA ATTTGTAAAT GCGTATTATC CGTGGAATGA AGAATTAGCA
AGAGAAGCGA AAGCGGATAC CCCTCATCAT GAGCCAATCA AAGAGAAACT GGTTGAGACC
GCCGCGTTTG AATATTCGAT TGAAATAGCT TGTACGCTTG ATGAATTAAA TACTTATCAA
GTAGGTGCGT TTTTTCTAGG GAAAACGAAA GAAGAAGAGA GCATATCGTT ATGGACAAAA
TCCCAAACTG ATAAAGGGTT TAGCTTACTG ACTGCAAGCG TAAAGGTAAA TGAGCCTAAG
AGCCTTACTC GTGAATTTTT CATTTCAAGC GGTTACAGCC TGACTTTTAA CGATGTGTCT
CCTGTTAAAA AAGGCTCTGG CACTCATGCT GAGTCTTTTG TTCTTATTAA ACCTTCAATT
CAAATCTATA ACCGCTTGGC ATGGCCTAAA GTCGGCTTCT TTTATCATTT CATTAATGAT
GAATTAGAGA ATGAATACCC ACTCTCTGGT GGTGATAAGT GGTCATTCAA AGTGACTTAT
TCAAAAGGAA AAACACTGTC TTCTGACTTA TTGTCAGAGC ATGAATACGC TTTTATTTTA
TTGCCTTGGA AAATAGACAA TACGGTTATC TCTCGCCAAC ACTTACTGTA TACCAAAGAG
AAAATGACCC AAGAGCAATT GAGTGAGATA AACGATCAAT GGCTCGATGA AAGCGCGTGT
CTGATTAATC CCGATGAAGT GGTTACTGCT CGTTCAGATA AAATTGTCCT GAGAGAGAAA
GAAGACAATG GACGAATCAC TTATACGGTT CAATCTGGTG ATACCCTTGG CTTAATAGCG
AAAAAGCAAG GCATTACGTA TGATGGACTT CTGGCTTTAA ATCCTCAGAT AACGAACCCT
GATTTAATTC AAGTGGATGA TGTTGTAACA ATAAAAGACA CGCCTCCAGA GCAAGAAAGC
ATCCAGTTTC ATGTGTGTAA AATCAAGTCA GAGACAGGTC AGCGTGAAAC GTGGGGCGAA
ATCGCAGAGC AACATGGTAT GGGTGCGAAA GAGTTGTATG ATTTAAATGC AGATAACCCA
ATGCATAAAG ACGGAGCCTT AGCGTTAGAC AACGAATTAC GAGTGAAGAA CACAGCGCAG
AGCGAAGCAC TTGACGTCGT TTATAGAAAC GCTCAAAGTC CAGAGGACGT GAGCGGTGAT
AAATGGGTAT TTTCTTTTGC TAATGTGTGG AGTGTGATAG AGAAACCATT CTCAGACGTT
GCCCATATGT TTGTGCAAGA CGATACGGCT CTGAATAAAA ACACGTGCGT TATTAAAGTC
AATTCGATAC GACTTCATTC TAAAATATTA TCTGGCTCTG ATGGACTTGA GGCGATAGCT
CAAGAAAAGA AAGGAGCAAT TAAGAAAGGC GATAAAGACG CGCCCAAGAG TAATGAAATC
AAAACCATTC AAGAGGCGTT ACTTGCGCTT AATTTTGATT TAGGTAAGTA CGGTGCCGAC
GGTGATTTTG GCAGCGGAAC CGAACAAGCA GTAATAGATT TTCAGCGTGA GTTTGTGCCA
ACGCATGAAG TGCATCCTGA ATATGAAATG AAAAAGTCTG ATGGTGTAGT GGGAAATCAG
ACGTTACTAG CCTTAGATGA AGCTGTTACA ATCGAATGGA AGTACATTAG AAAATGTAAA
TTAATGATTG ACCATCACTT TATACAATTG TTAGAAGGAA CAAAAAAAGA AGGTTATGTT
CCAATGCCAG ATAAGAGTCA AAGTGGCGTT ACTATTGGGA GTGGTTTTGA CTTAGGTGCT
CGAAATGTTA ATGATTTAAT TAGCATGGGG CTACCTGAAT CATTGGTTGA AAAATTCACA
CCTTATTTAG GCTTAAAAAA ATATGAGGCT GTTAATAAGT TGAAAGCATT ACCTCTTTCA
CTTACGGAGG CCGATCTTTC TGTTGTAGAA GCAACAGTTA AAAAAAGTGA AACAGATAAG
ATTATAAAAT TATTTAATTC ATCAAGTAAG GTTAAGTTTG AGTGCTTGCC AGCTAACGCT
CAAACAGTCG TAGCATCTGT TGCTTATCAA TATGGTTATT TACCGCGTAG AGCTGAAAAA
TTTTGGGAAC AAGCTATTAA TCAAGATTGG AATGGTATGT ATGATAATTT AATGGCGTTT
GGTGATGATT TTGAAGTTAG ACGACATAAA GAAGCTAAGT TAATTAAGGA GATTTTGTAG
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| Protein sequence | MKVDDRKFVN AYYPWNEELA REAKADTPHH EPIKEKLVET AAFEYSIEIA CTLDELNTYQ
VGAFFLGKTK EEESISLWTK SQTDKGFSLL TASVKVNEPK SLTREFFISS GYSLTFNDVS
PVKKGSGTHA ESFVLIKPSI QIYNRLAWPK VGFFYHFIND ELENEYPLSG GDKWSFKVTY
SKGKTLSSDL LSEHEYAFIL LPWKIDNTVI SRQHLLYTKE KMTQEQLSEI NDQWLDESAC
LINPDEVVTA RSDKIVLREK EDNGRITYTV QSGDTLGLIA KKQGITYDGL LALNPQITNP
DLIQVDDVVT IKDTPPEQES IQFHVCKIKS ETGQRETWGE IAEQHGMGAK ELYDLNADNP
MHKDGALALD NELRVKNTAQ SEALDVVYRN AQSPEDVSGD KWVFSFANVW SVIEKPFSDV
AHMFVQDDTA LNKNTCVIKV NSIRLHSKIL SGSDGLEAIA QEKKGAIKKG DKDAPKSNEI
KTIQEALLAL NFDLGKYGAD GDFGSGTEQA VIDFQREFVP THEVHPEYEM KKSDGVVGNQ
TLLALDEAVT IEWKYIRKCK LMIDHHFIQL LEGTKKEGYV PMPDKSQSGV TIGSGFDLGA
RNVNDLISMG LPESLVEKFT PYLGLKKYEA VNKLKALPLS LTEADLSVVE ATVKKSETDK
IIKLFNSSSK VKFECLPANA QTVVASVAYQ YGYLPRRAEK FWEQAINQDW NGMYDNLMAF
GDDFEVRRHK EAKLIKEIL
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