Gene VSAL_I0027 details

Gene Information

• Locus tag: VSAL_I0027
• ID: 6986262
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Aliivibrio salmonicida LFI1238
• Kingdom: Bacteria
• Replicon accession: NC_011312
• Strand: +
• Start bp: 28436
• End bp: 29215
• Gene Length: 780 bp
• Protein Length: 259 aa
• Translation table: 11
• GC content: 33%
• IMG OID: 643378399
• Product: hypothetical protein
• Protein accession: YP_002261588
• Protein GI: 209693660

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTGTTGT GGCACTACAC GTCAGTTGAA GTATTATCAT CCATTTTAGG GCAAGCAAAG 
CCAACTTTGC GTGCTACACA TATAAATTAT CTAAATGACT CGGTTGAGCT TAAGCATGGT 
TTAGATGCAA TCAAAAATAT CTTAATAAAA ACTCACGACC CTTCAGTTAA TGATATTGTT 
GAAGATATCA ATGAACTATT AGATGATAAT TATGACCCTC ATATCTTTTC ATTTAGTTTA 
TCTGAGGCTA AGGATTCTTT GTACCAATGG CTAGCTTATT GTCCAAGCAA TGGTGGCGTG 
TCTCTTGGTT TCGAATTTTC TGACACCATG GTGATGGAAG ACGTAATATG TGTTAAAAAT 
GCATTTGAGT TACCTTTGCC TAATTACCCA TCATCTCAAA TTCCACAATA TAGAAAGTGT 
AATTATTTTT TATCTGAGAT AGACATCAAG ACTGATTGGT ATCGCCCTCA AAATGGAAAG 
ACTACAAAAG CAAATTTATT AACAAATGCT ATGTTTTTAA AGCATAGTGC TTTCCATTTC 
GAGCAAGAAC ATAGATTGTT TTTTCATCCT ATGCCAAATA GTCAATTCTA TGTTCCTGCT 
AAATTTCAAG GTTCTAAACC ATATGTGGAT TTTCACTTCG ATCCTAAGAT TTTGAAATAT 
GTGTGTGTAT CACCACGTGG TAATAAAGAT ATTGGCGTAA AAATAGTTAA AAAAATTCTT 
TCTACATATG GCTTTAACCA CGTAGAAGTC ATTGTAAGTA GCATTCCTTT TAGAGAGTAA 

 

Protein sequence

MLLWHYTSVE VLSSILGQAK PTLRATHINY LNDSVELKHG LDAIKNILIK THDPSVNDIV 
EDINELLDDN YDPHIFSFSL SEAKDSLYQW LAYCPSNGGV SLGFEFSDTM VMEDVICVKN 
AFELPLPNYP SSQIPQYRKC NYFLSEIDIK TDWYRPQNGK TTKANLLTNA MFLKHSAFHF 
EQEHRLFFHP MPNSQFYVPA KFQGSKPYVD FHFDPKILKY VCVSPRGNKD IGVKIVKKIL 
STYGFNHVEV IVSSIPFRE