Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I0017 |
Symbol | groEL |
ID | 6986255 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | - |
Start bp | 17172 |
End bp | 18809 |
Gene Length | 1638 bp |
Protein Length | 545 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 643378389 |
Product | chaperonin GroEL |
Protein accession | YP_002261578 |
Protein GI | 209693650 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0459] Chaperonin GroEL (HSP60 family) |
TIGRFAM ID | [TIGR02348] chaperonin GroL |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTGCTA AAGACGTTAA ATTTGGTAAT GACGCACGAA TCAAAATGCT AGAAGGTGTA AATGTTCTGG CTGATGCGGT TAAAGTAACT TTGGGTCCTA AGGGTCGTAA CGTTGTTTTA GATAAATCAT TTGGCGCACC AACGATCACT AAAGATGGTG TTTCTGTTGC ACGTGAAATC GAACTTGAAG ATAAGTTCCA AAACATGGGC GCACAAATGG TTAAAGAAGT GGCTTCGCAA GCGAATGACG CGGCGGGCGA CGGAACAACA ACGGCAACCG TTCTTGCTCA AGCTATCATT GCTGAAGGCC TAAAAGCCGT TGCTGCGGGT ATGAACCCAA TGGATCTTAA ACGTGGTATC GACAAAGCAG TTATTGCTGC TGTTGAAGCA CTTAAAGATC TATCTGTTCC ATGTGCTGAT ACAAAAGCGA TCGCGCAAGT AGGTACTATC TCTGCAAACT CTGATTATAC TGTTGGTAAT CTTATTGCTG AAGCAATGGA AAAAGTAGGT CGTGACGGTG TTATCACTGT TGAAGAAGGC CAATCTCTTC AAGACGAATT AGACGTTGTT GAAGGTATGC AGTTTGATCG CGGTTACCTA TCTCCATATT TCGTAAACAA CCAAGAAGCC GGTTCTGTTG ATCTAGACAG CCCATTCATC TTGCTTGTTG ATAAAAAAGT ATCAAACATC CGTGAATTGC TTCCAACTCT AGAAGCAGTA GCGAAAGCAT CTCGTCCTCT TCTTATCATC GCTGAAGATA TTGAAGGCGA AGCGCTTGCT ACTCTAGTTG TGAACAACAT GCGTGGTATC GTTAAAGTTG CAGCGGTTAA AGCACCTGGT TTTGGTGACC GTCGTAAAGC AATGTTACAA GATATCGCGG CATTAACTGC GGGCTCTGTA ATTTCAGAAG AGATCGGTTT AGAACTTGAA AAAGTAGTTC TTGAAGATCT TGGTCAAGCG AAGCGTGTAA CTATTACAAA AGAAACAACA ACTATCATCG ATGGTGCTGG TGATGAGACT ATTATCTCTG GCCGTGTTTC TCAAATTCGT CAACAAATCG AAGATGCAAC CTCTGACTAC GATAAAGAAA AACTTCAAGA GCGTGTAGCT AAATTGGCTG GCGGTGTTGC AGTGATCAAA GTGGGTGCGG CGACTGAAGT TGAGATGAAA GAGAAGAAAG ACCGTGTTGA AGATGCACTT CACGCGACTC GCGCAGCCGT TGAAGAAGGT GTTGTTGCTG GTGGTGGTGT TGCACTTATC CGTGCTGCGT CTAAAGTTGT TAACCTTGAA GGTGACAATG AAGAGCAAAC TGTGGGTATT CGTTTAGCAC TTCGTGCTAT GGAAGCACCA CTTCGTCAAA TCGTTAAAAA CGCAGGTGAA GAAGATTCAG TTGTTGCTAA CAACGTTCGC GCTGGTGAAG ATAACTACGG TTACAACGCA GCTACTGGCG TTTACGGCGA CATGATCGAA ATGGGTATTC TTGACCCAAC TAAAGTAACG CGTTCTGCAC TTCAGTTCGC AGCATCGGTT GCGGGTCTTA TGATCACAAC AGAAGCGATG ATCACTGATA AGCCACAAGA TTCAAGTTCT TCTATGCCAG ATATGGGCGG CATGGGCGGC ATGGGCGGCA TGATGTAA
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Protein sequence | MAAKDVKFGN DARIKMLEGV NVLADAVKVT LGPKGRNVVL DKSFGAPTIT KDGVSVAREI ELEDKFQNMG AQMVKEVASQ ANDAAGDGTT TATVLAQAII AEGLKAVAAG MNPMDLKRGI DKAVIAAVEA LKDLSVPCAD TKAIAQVGTI SANSDYTVGN LIAEAMEKVG RDGVITVEEG QSLQDELDVV EGMQFDRGYL SPYFVNNQEA GSVDLDSPFI LLVDKKVSNI RELLPTLEAV AKASRPLLII AEDIEGEALA TLVVNNMRGI VKVAAVKAPG FGDRRKAMLQ DIAALTAGSV ISEEIGLELE KVVLEDLGQA KRVTITKETT TIIDGAGDET IISGRVSQIR QQIEDATSDY DKEKLQERVA KLAGGVAVIK VGAATEVEMK EKKDRVEDAL HATRAAVEEG VVAGGGVALI RAASKVVNLE GDNEEQTVGI RLALRAMEAP LRQIVKNAGE EDSVVANNVR AGEDNYGYNA ATGVYGDMIE MGILDPTKVT RSALQFAASV AGLMITTEAM ITDKPQDSSS SMPDMGGMGG MGGMM
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