| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I0010 |
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| Symbol | dnaN |
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| ID | 6988411 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | + |
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| Start bp | 8866 |
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| End bp | 9975 |
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| Gene Length | 1110 bp |
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| Protein Length | 369 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 643378383 |
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| Product | DNA polymerase III subunit beta |
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| Protein accession | YP_002261572 |
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| Protein GI | 209693644 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0592] DNA polymerase sliding clamp subunit (PCNA homolog) |
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| TIGRFAM ID | [TIGR00663] DNA polymerase III, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000914164 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAATTTT CTATTGAACG CAGCCATTTA TTAAAACCGC TGCAACAAGT ATCTGGAGCC
TTAGGTGGCC GTCCATCATT GCCTATTTTT GGTAATATTT TGCTTCAAGT TGAAAATGGT
CAACTGTCGA TGACAGCAAC AGATCTTGAA GTAGAACTTA TTAGTAATAT TCTGTTAGAA
GGGGATTTTG AAGCGGGTGC GATTACGGTG CCTTCTCGTA AGTTCTTAGA TATCTGTCGT
GGTTTACCTG ACGGTGCAAA TATTACTATT GTTTTAGAAG GTGATCGTGT TTTAGTTCGT
TCTGGACGTA GCCGATTTAC ATTAGCAACC TTACCAGCTC AAGATTTTCC GAATATAGAA
GGCTGGCAAA GTGAAGTTGA AATTACGCTT TCTCAAGCAC AACTTCGTAA GCTAATTGAA
AGTACGCAAT TCTCAATGGC AAACCAAGAT GTTCGTTATT ACCTTAATGG TATGATGTTT
GAAACTCAGG GGACTATTTT TCGCTCCGTT GCGACAGATG GACACCGAAT GGCAGTATGT
AACATGCCAG TAGAGTCAGA ACTTCCTGAG CAACAAGTGA TCATGCCACG CAAAGGTATT
CAAGAGCTAG TACGCCTTCT TGACTCGCCA GAACAGAGTG TTACGTTACA GTTTGGTAAT
TCAAATGTGC GGGCTGAGGT GAATAACTTT ATCTTCACTT CTAAGCTTGT TGATGGTCGT
TTTCCTGATT ATCGACGTGT AATGCCGCAA AGCAGTAATA AAACACTAGA AGCCGATTGT
GACGAATTGC GTCAAGCGTT TGCGCGTGCT GCTATTTTAT CGAATGAAAA ATTCCGAGGT
GTTCGTGTTA ATTTGGCAAA CAACCAAATG CGTATTACAG CGAACAACCC AGAGCAAGAA
GAAGCAGAAG AAATCTTAGA TGTCGATTTC CAAGGTGAAG ACATTGAAAT TGGTTTTAAC
GTTAGCTATG TACTAGATGT ACTAGATGTA CTTAATACGT TGAAATGTGA ACGAGTACGA
ATTTCGATGA CAACAGCAAA TGCGAGTGCA TTAGTGGAAG ATTGTGCGAA CGATGAAGCA
CAATATGTTG TTATGCCAAT TCGTCTGTAA
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| Protein sequence | MKFSIERSHL LKPLQQVSGA LGGRPSLPIF GNILLQVENG QLSMTATDLE VELISNILLE
GDFEAGAITV PSRKFLDICR GLPDGANITI VLEGDRVLVR SGRSRFTLAT LPAQDFPNIE
GWQSEVEITL SQAQLRKLIE STQFSMANQD VRYYLNGMMF ETQGTIFRSV ATDGHRMAVC
NMPVESELPE QQVIMPRKGI QELVRLLDSP EQSVTLQFGN SNVRAEVNNF IFTSKLVDGR
FPDYRRVMPQ SSNKTLEADC DELRQAFARA AILSNEKFRG VRVNLANNQM RITANNPEQE
EAEEILDVDF QGEDIEIGFN VSYVLDVLDV LNTLKCERVR ISMTTANASA LVEDCANDEA
QYVVMPIRL
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