| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_p840_71 |
|---|
| Symbol | |
|---|
| ID | 6961481 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Aliivibrio salmonicida LFI1238 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011311 |
|---|
| Strand | - |
|---|
| Start bp | 81300 |
|---|
| End bp | 82244 |
|---|
| Gene Length | 945 bp |
|---|
| Protein Length | 314 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 28% |
|---|
| IMG OID | |
|---|
| Product | membrane protein |
|---|
| Protein accession | YP_002261561 |
|---|
| Protein GI | 215778421 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 45 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATAAAGT TACCTCATTA CACAATATTT TTGTTTTTTT TGACGATAAG CTTAAATGTA
TATTTGATGA CTTCAAATAT CGCCTTAAGT AATGATAGAG ACTCACCAGT TAAAAGCATA
AATCAAATGA TTTCTTTATG GGTTGAATCA CCGTCATTTC TTGATGATGT GTACACGTTT
AACACTGATG CAATTGATGA AGGAGTTAAT CGTATTCTAA AGTTTTATCA GAATGATATA
GACAGAGATA TTTGCATTTC TGTTTATGTT AAAAGTTTTT CTGATAAAAC AAATGAATCT
GAAGCTTGGT CTTCTTGTAG TCCAGGAAAT TCAATGTCTA AAATGACATC AAAAAACAAA
GAAATAAAAA CTAATGAATT TATTATAAGT ATTGGGAATG ACAATTTAGG TACGATTACA
TATTTTATGG CCTCATCCAA CACTACAATT TATCGTAATA TCATTATTTT CATATTGTTA
GCAATTAGCT ATTCAGTGTT ACTTTTTGTT TGTCTAAGAG CTAGATCTAA AAACAAAGTC
ATTATTGATA AGGATAAAAA TCAAGAAAAA GCCACAAACA TTACAAACAT TACAAATATT
ACAAATATTA TGAATAGAAA CAAACGGTCA TTTGCTATTC ATAAAGATGT TGTTTACATC
TCCTACAATC ACCCCTACTG CCATGTATTT TATCGCAATG GACAACAAGC ATCATTAAGG
TGTTCACTTA CTGAATTAGA AAAATCTTTT CCTACAATTG ACTTAGTTAG AGTAAATAGA
TCTATATCCA TAAATGAAGA GCTCTTGATG GAACAAGACA TAATTAAAAC CAATCTTACT
AATAACTCAA TATCTATAAG AATAAAGAAT ACAAAAATTG ATTTGATTAT AGGAAATAGT
TATAAAAAAT ATTTCTTAAT AAAAGTGAAA GGAGAGGGGC AATGA
|
|---|
| Protein sequence | MIKLPHYTIF LFFLTISLNV YLMTSNIALS NDRDSPVKSI NQMISLWVES PSFLDDVYTF
NTDAIDEGVN RILKFYQNDI DRDICISVYV KSFSDKTNES EAWSSCSPGN SMSKMTSKNK
EIKTNEFIIS IGNDNLGTIT YFMASSNTTI YRNIIIFILL AISYSVLLFV CLRARSKNKV
IIDKDKNQEK ATNITNITNI TNIMNRNKRS FAIHKDVVYI SYNHPYCHVF YRNGQQASLR
CSLTELEKSF PTIDLVRVNR SISINEELLM EQDIIKTNLT NNSISIRIKN TKIDLIIGNS
YKKYFLIKVK GEGQ
|
|---|
| |