Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_p840_59 |
Symbol | |
ID | 6961470 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011311 |
Strand | - |
Start bp | 69201 |
End bp | 70049 |
Gene Length | 849 bp |
Protein Length | 282 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_002261549 |
Protein GI | 215778409 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 0.202791 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAATATTA ACCCTCAAGA ATCCAAAGTT ATTTTTTGTG GACTACCATC CTCAGGTAAA ACTTCTTTTT TAGGCGCATT AAGTTATTTA GCAGAAAACG ATGAAGTAGA TAAAGACTTA GAATTAGCAG TTTTACCAAA AGAAAGACTT TTTTTTAATG AGCTTGCAGA TAAGTGGGTT AGCTGCGAAC CCATGCTACG AACAAAAATA TCTAGTTCTG ATAAAATCGA AATGACTTTA AAAAAAAGCA ATCAACATTT TTCTATAGAA ATGCCAGATC TATCTGGAGA AACTTGGAGT GAGCTTTGGA CTGAACACAA AATGGATAAT CAACTGATTT CATTTCTTAA TAAAACTAGT TGTGTCATTT TCTTTATACA TGTGGATGAA TTAATAGTGC CAATGTCGAT TTGCGATGAA GCTTCTATAA TTAAAGGAGA GTCTGCTGAT CATAAAGATA ACAATACTAA GTGGAATCCT TCCGAACACA CTCCTACACA ATCTATTGTT ATAGATCTTT TGAGAAAGTT ATCTACGCTG TTAGCTGACA CAGATAAGAA ATTAGCAATA GTTCTTTCTG CATGGGACAC GCTCCCTAAT GGCTCAGTTC CTATGAGCTT CCTTAAAAAA GAATTACCAT TATTATCTCA ATATTTGAAT TGTAAATTTG ATTATGAACA AATTAAAGTT TTCGGTGTAA GTGCTCAAGG TGGCAGTTTA AATACACCTG AAAATCAAGA CATTTTACTT TCTGAAGATG AACCAAGTAA AAGGATAAAA ATCACTCAAG ACGGAATCGA ATATTCAGCC GATCTCACAA AAATTTTATC GTGGTTAATC AATGAGTAA
|
Protein sequence | MNINPQESKV IFCGLPSSGK TSFLGALSYL AENDEVDKDL ELAVLPKERL FFNELADKWV SCEPMLRTKI SSSDKIEMTL KKSNQHFSIE MPDLSGETWS ELWTEHKMDN QLISFLNKTS CVIFFIHVDE LIVPMSICDE ASIIKGESAD HKDNNTKWNP SEHTPTQSIV IDLLRKLSTL LADTDKKLAI VLSAWDTLPN GSVPMSFLKK ELPLLSQYLN CKFDYEQIKV FGVSAQGGSL NTPENQDILL SEDEPSKRIK ITQDGIEYSA DLTKILSWLI NE
|
| |