| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_p840_56 |
|---|
| Symbol | |
|---|
| ID | 6961467 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Aliivibrio salmonicida LFI1238 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011311 |
|---|
| Strand | + |
|---|
| Start bp | 62129 |
|---|
| End bp | 64735 |
|---|
| Gene Length | 2607 bp |
|---|
| Protein Length | 868 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 32% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002261546 |
|---|
| Protein GI | 215778406 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0000490107 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTAAAAG CAATTCATCT AGATCTTGAT AAAAGTGAAT TTTTTGATTC TTATAATGAT
GATGAGTTCT GGCAAAGAAA TGCAAAGAAC ACACTTATAG ATATGCTTAT AAGCACTTGT
AAAGATGCTC AGGACTATAG ACAATCACGC TTAAATAATA AAAATAAAAT CAGTGCTGCT
CATAATGCTA TTTGTATTAG CGGTAGTCGA GGTGCAGGTA AGACCGTCTT TTTACGTAAC
GCTAAAAAAA TTTGGGAAGA AGCAAAGTTA GATAATATTG AAAAAATAAA TATTTCTAAT
TTGTATTTTG CGGAAACAAT TGATCCGACA CTATTAAATG GTCATGATAA TTTTGCTAAC
GTTATTATTG CTCAACTATA TAATGCAGTT GAAAATAAGC TATCATCGCC ACATATAGAT
GTGATGAAGA AAAATAATTT TTATACATCA CTTAAGAAAC TAGCTGAATC ATTAGGAAAA
AAGAGTGATT TTGCTGACCA TACGGGTATT GATCGAATTT TAAAATATCG TTCGGGTATA
CAAGTTGAAG CTTTCTTTCA TAAGTACGTA GAAAACTGTG TAGAGCTCTT AGGTTGTCAA
GCTATCGTTG TACCAATTGA TGATGTCGAT ATGGCACTAA ACCGAGCGGT CGAAGTGTTA
GATGAAGTAC GCAGATTATT AAGTTGTCCT TATATCATTC CAATAGTAAG TGGCGACCAT
GAACTTTATT CGCATATGGT ACGTGTTCAT TTTGAAAAAA ATGCAACAGA CAATAAGAGT
ATATCAGAAG AAACCACTAG ATCTGGACAC AAAATAGGAA AGCTCCTTGC TGATTCCTAT
CTTACAAAGG TATTTCCAAA TCATTTGCGC TTACCATTAT TGGCAATTGA CAGGTTACTT
CCACATTTAT TAATCAAAGA AAAAGGTATC AGTAATAAAG GTATCAGCTT TGTTAAGTAT
GAAAAAATGC TGACTCATGT TTTCTTTTAT TTGTGCAATG GAGAAGAACG AAGTACTGAA
TATCCAAAGC CGGAAAGTGC TCGTGAAGTA ACTCAGTTAA TTAAAGCACT AACACCATTA
AAACTACAAG AATTTCAAAA ACATGATTTA TGGAATACTT TCAAATCGTG GGCAGAACAG
AAGCATCATG GTGCAACTTA CACGAATGCA GTCTCAATAA GTCAATTATC TGATTATAAC
TCAGAAGAAA CAATCTTTAG ATTTGATCAA CTCTTAGCTT TCAACCCTAT TTCACAAGTA
AAAGAAAGCA TTCCTTGGGC AATTAAACCA TTTCTATCTG AGCAAGAAAT CGCCATACGA
GATTTATATG GAAAGTCGGT TAAAAAGAAA GATTTGAGCG AGAATGACAA TGTAAACATT
ATAAATAGTG TATTTACTCA TGACATGAAA ATATTGCGTA GCATGCCACC TTTGGAGCTA
TATAGTAGCG ATATGACTTT GACAATAGAT ACTGTAAAAA AAGATGAAAC AAATTTACTA
CTTGCTGTCT ATACTCATAG AGATTTTTAC GGAAAACAAG GTAACAGAAG CTATAATATT
TTTTTTAGTC GAGCTTTTGA AATACTCTCA GTATCACTAT TATCAGTATC TACAAATATT
CAAGTAGCCA ATTGGGAAGC TCAGTTAGAT GAAATTATAG CGCGTGTTCC TTTCTATAGT
ATTCATGCAA TTAACCCGAC TAAGTATTTA GAGCAAGAAG GGGAGGACCT TACTCTAGCC
GAATCTGTAG TATCTGAAAA TATAAACGAA ACCTATAAAA CATCCCCTTT AGCTTTAAAA
ATAAAAGACT GGGAAGTAGC TAGTAAAGAA AAATTATCTG GATTAAATAA TTTATCTATA
TTACCGCTAA TTCATTCTGT TTTTAATAAA GTATTTACAC AATTACATAT ACTTCGTACT
GAAATTTCAA CGACAAAAAA ATATCCTGAA GAGTATTTAT CAGATACAGC ACGCCGATTT
GAATATATAG TGATCAATGC TTTTGCCAGT CTACTTAAGG ATGATTATGT TATCCAAGCT
AATGTAGCTA TTGGTGCACA ACTTAAAACA CTTAGAGATC ATAAGGAGTT TATGAGAGTT
GATAGAACAT TGTATCGAAA TATTAAAGGA ATGATTGATG AAACCGTAAA CTTGGATACA
CCTATATTAA TAGAAAAAAA ATCTTCTACA GCTAAACCTA AAGAAGACAT CGGTTCTATT
TTACTTGAAA TTATTTGGGC TCATCCAATA TTTGTTAACT TAAATAACAG TAAAATTTTA
ATGGATGAAC CAAAATTTCA GTTTACATTT TATAGTGCGC CCCCAATTAC ACCTTCTATA
GTAGTTACTT CAGTATCATT AAACTCATTA AAAGAATTTA AACACATATT AAGAAAAGAA
AATATTAATA TGAGTACTAA AGATATAACA ACTTGGGGTT TTAATAATAG AATTAAAGCT
CTTGAAATAT ATAATTCAGC ACAAAAAGAG CTAAAAGACA CTGGTAGTGA GCTGAAAAAA
GGTTCAGAGC AAAAAAGAAT GTTCGATGCA TTAAAAAAAG TAGTAGGGAC ACCTGATTTA
AGGGAACTTT TAAGAGATAA CTCATAA
|
|---|
| Protein sequence | MLKAIHLDLD KSEFFDSYND DEFWQRNAKN TLIDMLISTC KDAQDYRQSR LNNKNKISAA
HNAICISGSR GAGKTVFLRN AKKIWEEAKL DNIEKINISN LYFAETIDPT LLNGHDNFAN
VIIAQLYNAV ENKLSSPHID VMKKNNFYTS LKKLAESLGK KSDFADHTGI DRILKYRSGI
QVEAFFHKYV ENCVELLGCQ AIVVPIDDVD MALNRAVEVL DEVRRLLSCP YIIPIVSGDH
ELYSHMVRVH FEKNATDNKS ISEETTRSGH KIGKLLADSY LTKVFPNHLR LPLLAIDRLL
PHLLIKEKGI SNKGISFVKY EKMLTHVFFY LCNGEERSTE YPKPESAREV TQLIKALTPL
KLQEFQKHDL WNTFKSWAEQ KHHGATYTNA VSISQLSDYN SEETIFRFDQ LLAFNPISQV
KESIPWAIKP FLSEQEIAIR DLYGKSVKKK DLSENDNVNI INSVFTHDMK ILRSMPPLEL
YSSDMTLTID TVKKDETNLL LAVYTHRDFY GKQGNRSYNI FFSRAFEILS VSLLSVSTNI
QVANWEAQLD EIIARVPFYS IHAINPTKYL EQEGEDLTLA ESVVSENINE TYKTSPLALK
IKDWEVASKE KLSGLNNLSI LPLIHSVFNK VFTQLHILRT EISTTKKYPE EYLSDTARRF
EYIVINAFAS LLKDDYVIQA NVAIGAQLKT LRDHKEFMRV DRTLYRNIKG MIDETVNLDT
PILIEKKSST AKPKEDIGSI LLEIIWAHPI FVNLNNSKIL MDEPKFQFTF YSAPPITPSI
VVTSVSLNSL KEFKHILRKE NINMSTKDIT TWGFNNRIKA LEIYNSAQKE LKDTGSELKK
GSEQKRMFDA LKKVVGTPDL RELLRDNS
|
|---|
| |