Gene VSAL_p840_52 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVSAL_p840_52 
Symbol 
ID6961463 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAliivibrio salmonicida LFI1238 
KingdomBacteria 
Replicon accessionNC_011311 
Strand- 
Start bp57061 
End bp57801 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content41% 
IMG OID 
Producttransposase 
Protein accessionYP_002261542 
Protein GI215778402 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.00159101 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCAATC CTGACTTTAA ATGGAAACAC TTTGCACCAG AAATTATACT TTGGTGTTTA 
CGTTGGTATG GTTCAACACC AATGAGTTAC GCAAATCTCA GTGATATGCT CGCAGAGCGA 
GGCATATCGG TTAATCGCTC CACTATTTAC CGTTGGTTTA TTGAATATTC CCCTAAATTA 
CGAAAAAAGT TACGTCGTAA TTATCAATTC ATCAAAACCG ACTCATCCTG GCAACTTGAT 
GAAACCTACG TCAAAGTGAA GGGGAAATGG CACTACCTTT ACCGTGCTAT TAATAAGCAA 
GGAGAGACAC TCGATTTTTA TTTTTCCCAC AAGCGCAATA AAGAAGCGGC CTACCAATTC 
CTTAAGCGTT GCTTAAGATA TTACGACATA GACAATCAAC CTAAAACGTT AAACACGGAC 
AAACATTCCT CATACGCCAA TGCTATTGCT AGACTGAAGA AGGAAGGACG ACTACGAGAG 
GATGTCGAGC AGCGGCAAGT TAAATGCCTC AATAATGGCA TTGAGTCCGA TCATGCCCCC 
ATTAAGAAAT TGATCGTGGC CGCCGGTGGT TTCAAACTGA GGAAGCGAGC TTGGTCAACC 
ATTCAAGGAT TTGAATCTTT ACGAATGTTG AATAAGGGAC AATTTGATTT CTGGTTACGT 
AATGATAAAC GTAAAACCGT AGTGCGGGAG AGATCCGCCT TCATAAACCG ATTATTCAAT 
GTTGAGGTTA TTTTCGAATA A
 
Protein sequence
MTNPDFKWKH FAPEIILWCL RWYGSTPMSY ANLSDMLAER GISVNRSTIY RWFIEYSPKL 
RKKLRRNYQF IKTDSSWQLD ETYVKVKGKW HYLYRAINKQ GETLDFYFSH KRNKEAAYQF 
LKRCLRYYDI DNQPKTLNTD KHSSYANAIA RLKKEGRLRE DVEQRQVKCL NNGIESDHAP 
IKKLIVAAGG FKLRKRAWST IQGFESLRML NKGQFDFWLR NDKRKTVVRE RSAFINRLFN 
VEVIFE