| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_p840_46 |
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| Symbol | |
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| ID | 6961457 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011311 |
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| Strand | + |
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| Start bp | 49322 |
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| End bp | 51541 |
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| Gene Length | 2220 bp |
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| Protein Length | 739 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | |
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| Product | putative cell wall degradation protein |
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| Protein accession | YP_002261536 |
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| Protein GI | 215778396 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.0169743 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGTAG ATGATAGAAA ATTTGTAAAT GCGTATTATC CGTGGAATGA AGAATTAGCA
AGAGAAGCGA AAGCGGATAC CCCTCATCAT GAGCCAATCA AAGAGAAACC GGTTGCTACG
GCAGCGTTTG AATATTCGAT TGAAATAGCT TGTACGCTTG ATGAATTAAA TACTTATCAA
GTGGGTGCGT TTTCTTTAGG GAAAACGAAA GAAGAAGAGA GCATATCGTT ATGGACAAAA
TCCCAAACCG ATAAAGGATT TAGCTTACTG ACTGCAAGCG TAAAGGTAAA TGAGCCAAAA
AGCCTTACTC GTGAATTTTT CATTTCAAGC GGTCACTGCC TCACTTTTAA CGATGTGTCT
CCAGTTAAAA AAGGCTCTGG TACTCATGCT AAGTCCTTTG TTCCGATTAA ACCTTCTATT
CAAATCTATG ACCGCTTGGC ATGGCCTAAA GTCGGCTTCT TTTATCATTT CATTAATGAT
GAATTAGAAA ATGAATATCC ACTCTCTGGT GGTGACAAGT GGTCATTTAA AGTGACGTAT
TCAAAAGGAA AAGTACTGTC TTCTGATTTA TTATCAGAGC ATGAATACGC CTTTATTTTA
TTGCCTTGGA AAATAAACAA TACGGTTATC TCTCGCCAAC ACTTACTGTA TACCAAAGAG
AAAATGACCC AAGAACAATT GAGTGAAATT AACGCTCAAT GGCTCGATGA AAGCGCGTGC
CTGATTAATC CCGATGAAGT GGTTACTGCT CGTTCAGATA AAATTGTCAT GAGAGAGCAA
GAAGACAATG GACGAATCAC TTATACGGTT CAATCTGGTG ATACCTTTGG CTTAATAGCG
AAAAAGCAAG GGATTACCTA TAATGGACTT CTGACTTTAA ACCCTCAAAT AACGAACCCT
GATTTAATTC AAGTGGGTGA TGTTGTAACA ATAAAAGACA CACCTCCAGA GCAAGAAAGC
ATCCAGTTTC ATGTGTGTAA AATCAACTCA GAGACAGGGC AACGTGAAAC GTGGGGCGAA
ATCGCAGAGC AACATGGTAT GGGTGCGAAA GAGTTGTATG ATTTAAATGC AGATAACCCA
ATGCATAAAG ACGGAGCCTT AGCGTTAGAC AACGAATTAC GAGTGAAGAA CACAGCACAG
AGCGAAGCAC CTGACGTCGT TTATAGAAAC GCTCAAAGTC CAGAGGACGT AAGCGGTGAT
AAATGGGTAT TTTCTTTTGC TAATGTGTGG AGTGTGATAG AGAAACCATT CTCAGACGTT
GCCCATATGT TTGTGCAAGA CGATACGGCT CTGAATAAAA ACACGAGCGT TATTAAAGTC
AATTCGATAC GACTTCATTC TAAAATATTA TCTGACTCTG ATGGACTTGA GGCGATAGCT
CAAGAAAAGA AAGGTGCGAT TAAGAAAGGC GATAAAGACG CGCCCAAGAG CAATGAAATC
AAAACCATTC AAGAGGCGTT ACTTACGCTT AATTTTGATT TAGGCAAATA CGGTGCTGAT
GGTGATTTTG GTAGCGGAAC TGAGCAAGCG GTGATTGATT TTCAGCGTGA GTTTGTGCCA
ACGCATGAAG TGCATCCTGA ATATGAAATG AAAAAGTCTG ATGGTGTAGT GGGAAATCAG
ACGTTACTAG CCTTAGATGA AGCTGTTACA ATCAAATGGA AGTACGTTAG AAAATGTAAA
TTAATGATTG ACCATCACTT TATACAATTG TTAGAAGGAA CAAAAAAAGA AGGCTATGTT
CCAATGCCAG ATAAGAGTCA AAGTGGCGTT ACTATTGGGA GTGGTTTTGA CTTAGGAGCT
CGAAATGTTA ATGATTTAAT TAGCATGGGG CTACCTGAAT CATTGGTTGA AAAATTCACA
CCTTATTTAG GCTTAAAAAA ATATGAGGCT GTTAATAAGT TGAAAGCATT ACCTCTTTCA
CTTACCGAGG CCGATCTTTC TATTGTAGAA GCAACAGTTA AAAAAAGTGA AACAGATAAG
ATTATAAAAT TATTTAATTC ATCAAGTAAG GTTAAGTTTG AGTGCTTGCC AGCTAACGCT
CAAACAGTCG TAGCATCTGT TGCTTATCAA TATGGTTATT TACCGCGTAG AGCTGAAAAA
TTTTGGGAAC AAGCTATTAA TCAAGATTGG AATGGTATGT ATGATAATTT AATGGCGTTT
GGTGATGATT TTGAAGTTAG ACGACATAAA GAAGCTAAAT TAATTAAGGA GATTTTGTAG
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| Protein sequence | MKVDDRKFVN AYYPWNEELA REAKADTPHH EPIKEKPVAT AAFEYSIEIA CTLDELNTYQ
VGAFSLGKTK EEESISLWTK SQTDKGFSLL TASVKVNEPK SLTREFFISS GHCLTFNDVS
PVKKGSGTHA KSFVPIKPSI QIYDRLAWPK VGFFYHFIND ELENEYPLSG GDKWSFKVTY
SKGKVLSSDL LSEHEYAFIL LPWKINNTVI SRQHLLYTKE KMTQEQLSEI NAQWLDESAC
LINPDEVVTA RSDKIVMREQ EDNGRITYTV QSGDTFGLIA KKQGITYNGL LTLNPQITNP
DLIQVGDVVT IKDTPPEQES IQFHVCKINS ETGQRETWGE IAEQHGMGAK ELYDLNADNP
MHKDGALALD NELRVKNTAQ SEAPDVVYRN AQSPEDVSGD KWVFSFANVW SVIEKPFSDV
AHMFVQDDTA LNKNTSVIKV NSIRLHSKIL SDSDGLEAIA QEKKGAIKKG DKDAPKSNEI
KTIQEALLTL NFDLGKYGAD GDFGSGTEQA VIDFQREFVP THEVHPEYEM KKSDGVVGNQ
TLLALDEAVT IKWKYVRKCK LMIDHHFIQL LEGTKKEGYV PMPDKSQSGV TIGSGFDLGA
RNVNDLISMG LPESLVEKFT PYLGLKKYEA VNKLKALPLS LTEADLSIVE ATVKKSETDK
IIKLFNSSSK VKFECLPANA QTVVASVAYQ YGYLPRRAEK FWEQAINQDW NGMYDNLMAF
GDDFEVRRHK EAKLIKEIL
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