| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_p840_38 |
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| Symbol | |
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| ID | 6961449 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011311 |
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| Strand | + |
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| Start bp | 39139 |
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| End bp | 41583 |
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| Gene Length | 2445 bp |
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| Protein Length | 814 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | |
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| Product | putative cell wall degradation protein |
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| Protein accession | YP_002261528 |
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| Protein GI | 215778388 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.145908 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATCCAT CTTATATTGT TCAACGTGGC GATACGTTGC TTAACATTGC GATTAATAAT
GACGTTGCTT TTACCACCCT GCTTAAGTTA AACCCACAAT ATCAGCCCAA TCCTGATTTA
ATTCATGTGG GTGATAGCGT TCGCCTTCCT GAAGTTCTGA ACGATGAGGT GGTAAAACAG
GGGTATCTTA TTGAGCCCGT GCGCCCTCGT CCTGTATCAG ATACCTGTAC ATTGATGTCT
CCACCAGTGT GTCAACCAAA GGAGGTGCAT GACATCTTAT TTGTGACAGG CGAGCATAAA
ACGGATTTTT ACTGTGTGGG AGAGAAGGCG CATCAATTTG TAAAAGAAGA AGTTAAGGAG
ACGGATAAGC TGATTAAAGG TTATGTCGAA CTTCTTAATG CAACACCTAA TGAAGAAAGT
GCAACAAAAG AGCAAGTGGC ATTACATGCA AAAAAAAGAC AAGCGTGGTT AGAGGCGGCG
AGTTATGCAG GAGCTATCCA CTTATCTGAG TCAAGTCTTG ATAGGCAAAG TCAAAGAAAT
GAAGCAAGAA GACAAACAAA CGAGAAAAAC AATGAAAATG CGGAATTTAT AGAAACACAA
ATTTCCGAGC TTAAAAAGGC AAAGGCGTTT GTGACTAATT ACGATGAGAA TGGTTTTTAT
GTCGATAACG TTTCTGTTGG TGCATTAAGA TCAGAAGCGC TTGTGCGTAT TGATACCGAC
CTAGGTTTAT TACGTCAGCA ACAACTGATC ATCGTACAAA AAAGTGCAGA GAAAGCGCAA
AGTAAACCAT CACCAATAAA ACCAAATAAT CAGTCAGTCA ATCATGCAAA TATAAAAGGA
AAAAATAAGT TAAAGCGTCA TTCAATTGAA GTTTTTTCGG TGCTTGAGAA TAAATATATT
TATATTCGTG CTGATTTTTT TGACCGAGAA CGAGAGCACT GGCGTCAGCT ACCAGATAGA
ACCAATACCA GACAAGCGTT CATTGATAAT AATAAAAAAG GCGTCATGAA AGCCGTCGTA
AAAGACATTA GTGCTGATAT AAGAAGTAAT ATAAAAGAGG GTCCATTAAA AAATCAGATC
GCGAAATGGG ATGCAAAAGG ATGGAATTGG CTTGAATCCA AGAAGGAATA TAACTTATGG
GGAGAAGGGG ATAACACCAA AATAGCCGTG AGTTATGAAG CACAATTACT TCGCTGGGGG
GCGAATGCCG CAGCGACCAT CGATAAAACT GGGATTGCTA TTGGTGGAGA TGCGTCGGTT
TCTCTTGCAG AGGCTTCGGT AAAAATAGAA GGCTTCTTAC CTTATAAAGG GGGCTACGCA
GCTAAGTTAA CGTATACCGA TGCAAATAAA AAAACCGCCA CCTATGCTTT TGGGTGTTTT
AGGCTCAAAG GTGAAATGCA ATTAAGTGCC TTTGCTGGCG GAATGGTGAG TGCTGGTGCT
TCTGCTGGAA AAATACCTCA AGGGGATGGC AGTATTGGTG CCATGTACAG CCCTAATGTT
GCTATAGCGA CCTCAAATAG TAGCGGTCAG GTAGGCCTTA AAGTGGGTGG TTTTGCAGGA
ATGCAGGTTG GCGGTAAAGT TACTGGCAGT GCGGAATGGC AAGCCCCACC GAATGTGAAA
GAGAGCACTC ACATTGATTT TCAAAAATTA GCTGAAATTT CAGGAGAAGG AAACATCGCT
GGCGGTCTTG GTGCTGGTGT CGATTTTCAA TTAGCTTTTA GGGAAGGGGC TTTTTACTTT
GCGTGCTCAG GACGTTTGGT ATGTGGTCCT GGAGGGAGTG GCAGCTTTGC TTCTTTGATT
AACTTAGAGC AGTTGTGGGA GCTGGCGAAA GTGATCCTTC AAGGACTTCA ATGGGTAGGG
TATCGATTAC TTGAAAATAT AGATGAAGAG GCTTACAACT ATTTAATTAA GGCCAGTTAT
TTAGCGTTTA CTTCTGAGTT GTTGTGTAAG GAGCCTATTC AAGCTCTTCA GTATGCTGTT
AAATCAGGGG AGGAGGTAAT TATAGGCTTA TGGGATGAAA GAAAGGAAAC GATGGATCGA
CAAAAAGAGG CTGAAATTCT TTCTAAGCGT ATCATTAGTG AAGAGGTGTT TAGTGGCGTT
CCTTCGGATC AACTGTTGCC TGAAGTGGTA GGTATGATGC TCAATACCTT AGTGGAAGAC
TTTACTTTAC GAAGCGAGGA ATCACAAGAG ACTGCTATTT GTTACTTATT AAAGAAAACC
ATTTACAGTT GGCGTAAGTT TGAAGAGATT TTATCTCGTA TGAACGATTT TGGTACGAGA
GAAGCAGGCT ATGAAAAATT ATTCGCTAAT TTAAAACGTA TAAATACGGT CTTAGATGGT
GAGCAGCAAA GGGAATTTAA TGGCTGGGTT TATCGTTTAG CAAAAGCGAA AAAACAGTCA
GAGTTAATGT CCATGCCATT TACTCCAAAA GCTGAAATAA GTTGA
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| Protein sequence | MNPSYIVQRG DTLLNIAINN DVAFTTLLKL NPQYQPNPDL IHVGDSVRLP EVLNDEVVKQ
GYLIEPVRPR PVSDTCTLMS PPVCQPKEVH DILFVTGEHK TDFYCVGEKA HQFVKEEVKE
TDKLIKGYVE LLNATPNEES ATKEQVALHA KKRQAWLEAA SYAGAIHLSE SSLDRQSQRN
EARRQTNEKN NENAEFIETQ ISELKKAKAF VTNYDENGFY VDNVSVGALR SEALVRIDTD
LGLLRQQQLI IVQKSAEKAQ SKPSPIKPNN QSVNHANIKG KNKLKRHSIE VFSVLENKYI
YIRADFFDRE REHWRQLPDR TNTRQAFIDN NKKGVMKAVV KDISADIRSN IKEGPLKNQI
AKWDAKGWNW LESKKEYNLW GEGDNTKIAV SYEAQLLRWG ANAAATIDKT GIAIGGDASV
SLAEASVKIE GFLPYKGGYA AKLTYTDANK KTATYAFGCF RLKGEMQLSA FAGGMVSAGA
SAGKIPQGDG SIGAMYSPNV AIATSNSSGQ VGLKVGGFAG MQVGGKVTGS AEWQAPPNVK
ESTHIDFQKL AEISGEGNIA GGLGAGVDFQ LAFREGAFYF ACSGRLVCGP GGSGSFASLI
NLEQLWELAK VILQGLQWVG YRLLENIDEE AYNYLIKASY LAFTSELLCK EPIQALQYAV
KSGEEVIIGL WDERKETMDR QKEAEILSKR IISEEVFSGV PSDQLLPEVV GMMLNTLVED
FTLRSEESQE TAICYLLKKT IYSWRKFEEI LSRMNDFGTR EAGYEKLFAN LKRINTVLDG
EQQREFNGWV YRLAKAKKQS ELMSMPFTPK AEIS
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