Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_p840_36 |
Symbol | |
ID | 6961484 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011311 |
Strand | + |
Start bp | 36284 |
End bp | 38548 |
Gene Length | 2265 bp |
Protein Length | 754 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | |
Product | VgrG protein, VgrG-2 |
Protein accession | YP_002261526 |
Protein GI | 215778386 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTAAAG AGATAGAATT TACGTTTACG GTGTTTGGCA CAGCCCATGA GTTTCGTGTC GAGAGTTTTC ATGTGGTTGA AGAGTTGTCT CGCCCTTTTC GCGTCACTTT GTCATTACTT TCACTTGATG CGGATATCGC GTTTGATGGA TTAAGTCGAA AACCTGCTTT ATTGACTCTG ATGGGTCAGG GGATGGGGAA TAGTCGTCAA TTTCATGGTG TTGTGAATGA GGTGCGTTAC TTAGGGGTTG GTCGTCGATT TTCCCGTTAT CAAATCACCC TCTCCCCTCA ATTATGGTTT CTAACTCAGC GTCAAGATTG TCGGATATTT CAAGATAAAT CTGTAATTGA TATTGTCACT GAGGTGCTTG ATGGCGGGGC TGTGACCGAT TATCGTTTTG AGCTTTCTGC CGCCTACCCT CCTCAAGAAT ACGTGCTTCA GTATCGTGAA ACGGACAGCC ATTTTGTTCA ACGTTTATTG GCTGAGCAGG GATTATGGTA TTACTTTGAG CATAGTGAAA GTAATCATAC GCTAGTGATT GTCGATAAAA ATGATGCAAT ACCTGAAATT ATCAGCTCAC CAGAAAATGC TTCTTATATG GGACCATTCG TGTATCAATC TGAGGGGGGC GGAAATGCAG ATCGGGAGCA CGTCTTTGAG TTAAGCACTT ATCATCGGGT TCGTACCGGT CACGTGACTC AAACCGATTA TAACTACGAG CAACCCCGTA TTCCTCTGCA AGTGGAGCAA CAAAGGGATC GAGATACTGA TTTGGCGTTT TTTGATTACC CAGGTCGTTA CGCTGAAGCC TCTCAAGGTC AGTTACAAGC GGTTTCTCTT TTAGCGGATA ATCATCTTGA AAGTCATCAA ATAGAAGCGG AAAGCAGCAT TATGCGCTTA ACGGCAGGCT ATAGCTTCGA GTTGATAAGA CACTCAAGAA AAGCCATAAA TAGAGATTAT ACGTTACTGT CAGTAAGCCA CTCTGGTCAT AACCCACAAG TGCATGAAGA AGAGTCCAGC GGTCTACCGA CCACTTATCA GAACCAGTTT ATTTGTTTGC CACGAGACGT TGAGTTCCGC TCCCCTACAC TCTCCGCTCC TGTGGTTGAC GGACCTCAAA CGGCTGTCGT TGTCGGGCCG GCAGGGGAAG AGATTTACAC CGATAAACTC GGACGCATTA AAGTGCAGTT TCATTGGGAT CGTTATGGAA ATAATGATGA GTATGCAGGG TGTTGGCTTC GTGTGTGTCA ATCAATGGCG GGGCCTACTT GGGGCGCGGT CTATTTACCG AGAATAGGAC ACGAAGTGGT CGTGACCTTT TTAGATGGGG ATCCTGATAG ACCATTAGTG ACTGGTACGG TATATAACGG AGTGAATACC CCGCCCTACC CATTACCTGA GAACAAAACT AAAACGGTGT TTCGTACCCA AACTCACAAG GGTGAGGGCT ACAATGAAAT GTCGTTTGAA GACGAAGCCA ATCAAGAGCA AGTTTATTTT CATGCTCAAA AAGACATGAG ATCCAAGGTT CTTAATAACC GATTCAGAAC CATAGGGAAT GATGAAGCGC TAACCGTTGG ACGTAATCAA GAAAATACCA TCAAGCAAGA CAGAAAAGAA ACCATTGAAG GTAATAAAAT TTCAATCACT AAGCAAACGT TCACGGAAAC GATTGAGCAA GATGTCAAGG TCAGCTACAA CGCTAATATG GAAAAGAACG TTGTTGCTAA ACAAACGTTA GAGGTTCATG GGGATCGTAA TAGTACGGTG GGAAAAAATG ATGAACTGAC TATTTCTGGT GATAAAAGCA CGATCACTAT GGGGGCAAGA AGCAGTGACA TTAGCGCTGA CGATACGTTA ACTGTTGGCA AACTCTTAAC AGTAGAGGTC GGAAGCAATG CCTCCATGAA ATCCGATGGT GAGTATACGA TTATTAGTGC GGATGAAATT AACGCGACAG TAGGCAGTTC CGGTTTCATT TTAAAAAATA ACGGCACCAT CACTTTGTAT GGCTCAAATA TTACGATTGA TGGCTCAGGC TCGGTCGCCT TAGTTGGGGG GAGTGTTGCG ATTAACCCTG GCGCGGCGGC CAGTCAAAGT AGCAGTGTGA GCGTTAACCC TCCTCGTACT TTTTCAATGT CGCCATTGGC ATCAACCAAG CCTGTGATGA ATTCTTCGGT GTACAGTGAA ATGGTTCAAG AAGGCTCAAT TATTAAAGAG CTATGTCAAT GCGGTCAGGG GGATATATGC AAACTGCACA GTTAA
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Protein sequence | MSKEIEFTFT VFGTAHEFRV ESFHVVEELS RPFRVTLSLL SLDADIAFDG LSRKPALLTL MGQGMGNSRQ FHGVVNEVRY LGVGRRFSRY QITLSPQLWF LTQRQDCRIF QDKSVIDIVT EVLDGGAVTD YRFELSAAYP PQEYVLQYRE TDSHFVQRLL AEQGLWYYFE HSESNHTLVI VDKNDAIPEI ISSPENASYM GPFVYQSEGG GNADREHVFE LSTYHRVRTG HVTQTDYNYE QPRIPLQVEQ QRDRDTDLAF FDYPGRYAEA SQGQLQAVSL LADNHLESHQ IEAESSIMRL TAGYSFELIR HSRKAINRDY TLLSVSHSGH NPQVHEEESS GLPTTYQNQF ICLPRDVEFR SPTLSAPVVD GPQTAVVVGP AGEEIYTDKL GRIKVQFHWD RYGNNDEYAG CWLRVCQSMA GPTWGAVYLP RIGHEVVVTF LDGDPDRPLV TGTVYNGVNT PPYPLPENKT KTVFRTQTHK GEGYNEMSFE DEANQEQVYF HAQKDMRSKV LNNRFRTIGN DEALTVGRNQ ENTIKQDRKE TIEGNKISIT KQTFTETIEQ DVKVSYNANM EKNVVAKQTL EVHGDRNSTV GKNDELTISG DKSTITMGAR SSDISADDTL TVGKLLTVEV GSNASMKSDG EYTIISADEI NATVGSSGFI LKNNGTITLY GSNITIDGSG SVALVGGSVA INPGAAASQS SSVSVNPPRT FSMSPLASTK PVMNSSVYSE MVQEGSIIKE LCQCGQGDIC KLHS
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