Gene VSAL_p840_17 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVSAL_p840_17 
SymboltraH 
ID6961432 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAliivibrio salmonicida LFI1238 
KingdomBacteria 
Replicon accessionNC_011311 
Strand
Start bp13541 
End bp14926 
Gene Length1386 bp 
Protein Length461 aa 
Translation table11 
GC content49% 
IMG OID 
Productconjugative transfer protein TraH 
Protein accessionYP_002261507 
Protein GI215778367 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones62 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAGA CACGCCCTCA CTTATTGCCG CTCTGTTTGG TGCTTTCCTT TTCAGTGTCC 
GCCAACGTCA ATCACTCCCT TGGGGGATTT TTTGACGAGC TTGGCTATCA CGCCAATGTC
AGCAACCCAA GCGCCTTTAA AGGCCAAAGT GCCAACTATT ACAACGGCGG CAGCCTGTTT
GTTCGCACCA AAATTCAAAA CGCTCAACTG GCCACGATGA CGGTGCCCTC CATTAAAGCC
GGTTGCAACG GCATCGATGC GTTCATGGGC GGCTTTTCTC ACATCAGCTC AGACCAATTG
GTTCAGTTCG GTAAATCGGT GGTTGCCAAC GCAACCCCAT TCGCCGTTGA TTTGGCGCTG
CAAACCTGGG CACCTCAAAT CAAACAAATC CGTGATAACT TGCAAAGCAT TGCCGACAAA
TGGGTCAATC AGTCCATCAA TTCGTGTGAA ACGGCTCAAG CCGCCGTGGG CGGATTGGCA
AGCTTTGCGC TGCCTCAAGC CAAACAGCAC GTCTGCGCCA CCATGGGCAC ACAAAATAAC
GCCTTCGCCG ATTGGGTCGC GGCCAAACAA GAGTGTGGCG TCGGTGGAAG AACCCCGAGC
CAACTCGTGA ATGCCCGTAA CACACCAGAA TTGGAAGACA TCACCAAAAC CTCACACAAC
ATCGTGTGGT CAGCCATCAT GAAAAACAGT TTTCTCTCCA GTGATACGGA GCTTGCCGAG
TTTTTAATGA CGCTCTCTGG CACCTACGTG TATAACGCCA ACGGTCAACC GACTTACTAC
CCATCACTGC TTGATGGCAA CAACAATCTG GTGGACGCTC TATTGAATGG CGGCACCATT
TCAGGCTATG ACTGTGACAA CACCGCCGCC AAAGCCTGTT TGTCCCTTCG CCGTAAAAAC
ACGTCCATTT CAAGCGGCAG TGCCATGCAA AGCAAAATAT ACGCACTGCT TAATGAGATG
AATCAATCGC TCATGAATGA CCGCCCTTTA ACTCAACAGC ACACCGCCTT TTTAGAATAC
ACCGACATTC CTATGCTCAG TTTCTTAAAA GAATACGCCC AAGGCGAAGG GACAGTAAGC
ACGTCTCTGC TTGATAAATA CGCCCGAGTC ATTGCGATTA ATCTCTTAAG TAAGTACCTC
AATAACATGC TGAACGTGAC CCAATACTCA CTCTCTAACA CCCAAAACGA CAAGAGTGAC
ATTGCCCTCA TCAGTGACGA CATCTCCAAC GCCAAACGAT TCATCAGCGA GCTCGATGAA
AAAGCCACTC GCGCCCTCAT CGCTCAAGAA GAAATGATCG CCAATGCTAA GGTCAGAAAA
GCCCAAATGG ACGCCGCATT GAGCAGTAAA ACCCGAAATA ACCTCTACTT TGGAGACAAA
TCATGA
 
Protein sequence
MKKTRPHLLP LCLVLSFSVS ANVNHSLGGF FDELGYHANV SNPSAFKGQS ANYYNGGSLF 
VRTKIQNAQL ATMTVPSIKA GCNGIDAFMG GFSHISSDQL VQFGKSVVAN ATPFAVDLAL
QTWAPQIKQI RDNLQSIADK WVNQSINSCE TAQAAVGGLA SFALPQAKQH VCATMGTQNN
AFADWVAAKQ ECGVGGRTPS QLVNARNTPE LEDITKTSHN IVWSAIMKNS FLSSDTELAE
FLMTLSGTYV YNANGQPTYY PSLLDGNNNL VDALLNGGTI SGYDCDNTAA KACLSLRRKN
TSISSGSAMQ SKIYALLNEM NQSLMNDRPL TQQHTAFLEY TDIPMLSFLK EYAQGEGTVS
TSLLDKYARV IAINLLSKYL NNMLNVTQYS LSNTQNDKSD IALISDDISN AKRFISELDE
KATRALIAQE EMIANAKVRK AQMDAALSSK TRNNLYFGDK S