Gene VSAL_p840_14 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVSAL_p840_14 
SymboltraF 
ID6961428 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAliivibrio salmonicida LFI1238 
KingdomBacteria 
Replicon accessionNC_011311 
Strand+ 
Start bp11549 
End bp12292 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content49% 
IMG OID 
Productconjugative transfer protein TraF 
Protein accessionYP_002261504 
Protein GI215778364 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones72 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATCGAT GCATCGCAAT GATCGCCTTT TTCGTCAGTA CCGGTGTATT GGCTGCGCCT 
AACGGATGGC GATGGTATAA CGAGCCAACC CAAGACGCTA AGGCACCGGC GCCCATCACA 
AAGCCAAACA CGGTGACTCG CACCTTAAGT GCCCGCGCAC AATTAACGTG GTTTAAAGAG 
CAACACCAAG AAGCGCAAGC CGCCGCCACG ATTGACCCAA GCAACAACCA AAAAGTAGAA 
AAAGCGATGC GACTCAATCA ATACGTGTCC AATCAATCCT CTCAATTTGG CATGACCTTT 
AAAGAAGTCT TATTGAGTCA CCCTGAGCTG TCTTACACCA AAGACAGACC CGTAGAGCAA 
GCGGCACGAA GCACGTATTT AGAGCTGGAG CGCGAGAAAA AAGTGCACAC CATTAAACAA 
ATGGCCGCTG AGGGATGGGG ATTTTTCTTT GTGTATGAAG GCAAAGACAC GTTAAGCCAA 
ACCCTCGCGC CAAGCATTCA GCAATTTGCG ACCACCCATG GCATTGAGGT GCTAGGGATA 
AGCAAAGACG GCACCACACT AGAGAGCATC AGAGAAAACA GAATGGACGA CAACACCCTG 
AACGTGGCGT ATTTGCCCGC GCTGCTGCTT GTGAACCCCA ACACAAAAAC CATTAAGCCG 
TTGGCGTATG GATTTATTTC ACAAGACCAA TTATTGGGGC GTTTTTACAA CGTGGCCACC 
CATTACAACA GCCCTGATTT TTAA
 
Protein sequence
MNRCIAMIAF FVSTGVLAAP NGWRWYNEPT QDAKAPAPIT KPNTVTRTLS ARAQLTWFKE 
QHQEAQAAAT IDPSNNQKVE KAMRLNQYVS NQSSQFGMTF KEVLLSHPEL SYTKDRPVEQ 
AARSTYLELE REKKVHTIKQ MAAEGWGFFF VYEGKDTLSQ TLAPSIQQFA TTHGIEVLGI 
SKDGTTLESI RENRMDDNTL NVAYLPALLL VNPNTKTIKP LAYGFISQDQ LLGRFYNVAT 
HYNSPDF