| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_p840_11 |
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| Symbol | traU |
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| ID | 6961430 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011311 |
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| Strand | + |
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| Start bp | 7732 |
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| End bp | 8736 |
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| Gene Length | 1005 bp |
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| Protein Length | 334 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | |
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| Product | conjugative transfer protein TraU |
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| Protein accession | YP_002261501 |
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| Protein GI | 215778361 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 72 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAACTGT CGGTATTTAT CCTTTTCATC AGTGTGTTGT GTTTACCTCA AAGAGCGTTA
GCGATGGGGG CAACGTGCAG TGGCCACTTC ATCAATCCCA TCAGTGACAT TTGTTGGTCT
TGTCTTTTTC CTATGACCAT AGGAAAAGTC CCGGTCATTC CATCCGCGTA CCCTGATACC
AACAACCCAA GCATTCCCAT CTCCTACTGC CCCAAGCCCC CGCCCGTGTA TGTGCAGATT
GGTTTGAACA TTGGTTATTG GGAGCCGTAT TCCTTGGTGG ATGTCACCCG CATTCCCTAC
TGCATGGTCA ACATGGGCAT GGAACTTGGC GGCGCCAATC AACCAGAAAT TGGCGGACGA
GTCACCAGTC GTGACAACGA CAGCAGCGAC GGCGGGTTCT ATCACGCCCA TTGGTACAAA
TACCCCATCA TCTATTGGCT GCAAATCATG CAATCCACTG CGTGCATGGC CACCGACACC
TTCGATGTCG CCTACATGAC CGAAGTGGAC CCGACCTGGG ACGACGATGA GCTCGCGTTT
GTGCTCAATC CTGAAGCGAT ATTGTTTGGC AATCCCATTG CGCAACTGGC GTGCGTGCCA
GAGGCCATCT TAACCACCAG CAATCTGGCG CTGCCATTGG ATGCGCTGTT TTGGTGCCTT
GGCTCGCAAG GCAGTGCCTA TCCATTAACC GGAACCACCA ATTATCGAGA CACCCCAATC
CAAGCGGCCA CCCTCATTAT GGAGCGATTG AACTACAAAT TGCACAGACA AGGGATTGTG
TGGGAAACCC GCGGGGAAAT CGGCGCCATT TGTTACCAAT GGCCAGAGCC GATATTGCCA
AAATCACGTT ATCGCTACCA AATGACGGCG CCTATCCCTG ACGCCCAATG GTGCCATCCA
TACACGACCA CAACCGCCAT CTGGGAATCA GGGCACGACA ACCCGACCAC TGGCGATAAC
TTTGGCTTCA TGAACTGGCG CAAACGCAAC TGCGTTTTCT TATAA
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| Protein sequence | MKLSVFILFI SVLCLPQRAL AMGATCSGHF INPISDICWS CLFPMTIGKV PVIPSAYPDT
NNPSIPISYC PKPPPVYVQI GLNIGYWEPY SLVDVTRIPY CMVNMGMELG GANQPEIGGR
VTSRDNDSSD GGFYHAHWYK YPIIYWLQIM QSTACMATDT FDVAYMTEVD PTWDDDELAF
VLNPEAILFG NPIAQLACVP EAILTTSNLA LPLDALFWCL GSQGSAYPLT GTTNYRDTPI
QAATLIMERL NYKLHRQGIV WETRGEIGAI CYQWPEPILP KSRYRYQMTA PIPDAQWCHP
YTTTTAIWES GHDNPTTGDN FGFMNWRKRN CVFL
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