Gene VSAL_p840_06 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVSAL_p840_06 
SymboltraB 
ID6961426 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAliivibrio salmonicida LFI1238 
KingdomBacteria 
Replicon accessionNC_011311 
Strand
Start bp2337 
End bp3767 
Gene Length1431 bp 
Protein Length476 aa 
Translation table11 
GC content53% 
IMG OID 
Productconjugative transfer protein TraB 
Protein accessionYP_002261496 
Protein GI215778356 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones60 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTCAATA AATGGCTTAA AAAAAGCACC AACGACGCCA CGGGCAGTTT TGAGCAAGGC 
TGCTTGATTA ATGAGCGCAG CATCAAACGC AACGGCATCA TTACACTGGT CATTCTTGTT
ACCCTTAGCA CCCTGGGTGG TGTCGGTTAC ACCGTCACTC GACCATCAAC GCCCCCACCG
ATAGAGCGTC CTCCGGTGGA CTTTGGCGCC ATCATTGAAG ACGACTTTAT CAGTGCCGAC
AATCAATCGG CACTCAGTGC GCAGCAAGAC ACCCTTCACA CCCAAGAGCG CACCATTGCG
GCACTAAAAA ATGAAGTCAA TCGCGTCAAC GCCAAACTGG ACAACACCGT GAACTTACAA
GAAGAGAGCT TTGCTCGCTT TAAAGACAAG ATGCAGGCGA CCTTTGAGCG CCAACGCGCT
GAAATGGTGT TGCAAAAAAA AGAAGCGCCC GCTCAGGAGA CGGACCTGTC CGTCGCCTTT
GGTGATAAGT CATTACCGCC TCGCGCCATT CCAAGCAGCA AGCACAACCC CAACGCCCCT
GAGTTTTCTT ATCAGAGCGC GGATGCGCCC ATCTTTGATA CCACCGGCAT TGACAGCTAC
GAGTTTAATT GGGCGCTCTC CGAGGAGGAG AAACCCAAGC GCACCATTCT GAATTACGTT
CCGACGGGCA CCTTTGTCAC CGCCTTGGTG ACGGGCGGCG CAGACGTCAA TGCAGGAGTG
CTTGGCCAAG GAGACACGGT GCCGATGGTA TTTCAAACCA TTAATGCCGG AATATTGCCC
AATGGGCAAT CATCACGCCT TAAGGACTGC ACCATCACCG GCTCAAGCTA TGGCGAAATA
TCATCCAGTC GCGGGATAGT GCGCACCAAT CGCATGAGCT GCATTTTTGA TGACGGCGAA
ATCATCGATT TGGCGGTGAA AGGCACGGTG TTTAATTTTG GTCGCAACGG CATTCGAGGC
ACCACCATTT TACGCAATGG GAAAATCGTT CAAATGGCGG GACTCTCAGG CATTTTGACG
GGCATTGGCG AGACAGGCAA AGCCTTGTCT TCCACAACGT CCGTGTCCGC CCTTGGCTCG
ACCTCCAGTC TGAACGGCTC GGACGCGGCC TTAAATTTGT TGGGCAATGC CACCGCCTCT
GTGGGCGCTA AGCTCTCGGA TTACTACATT CAACTGGCCG AGCTCTACCA CCCGATTGTC
GAATTAAACC CTGGCAATGT CGTGAACATT GTTTTTTTAG AAGGTTTTCC GTTGGACGCG
CTCGGTATTG AGAAGTACGA AGCCAAACAG CAAGTCCAAG AAAGTAGGTC CGGCAACAAT
CAACTGCTCG ATGTCATCAC CAACAACCCA CTGGCCAATC AATTACCTCA AGGGGTAAAG
GCCGCCATGG GCGCCCAAAC CGCGCCACTG ACCGATTTTG GCTCACGATA A
 
Protein sequence
MLNKWLKKST NDATGSFEQG CLINERSIKR NGIITLVILV TLSTLGGVGY TVTRPSTPPP 
IERPPVDFGA IIEDDFISAD NQSALSAQQD TLHTQERTIA ALKNEVNRVN AKLDNTVNLQ
EESFARFKDK MQATFERQRA EMVLQKKEAP AQETDLSVAF GDKSLPPRAI PSSKHNPNAP
EFSYQSADAP IFDTTGIDSY EFNWALSEEE KPKRTILNYV PTGTFVTALV TGGADVNAGV
LGQGDTVPMV FQTINAGILP NGQSSRLKDC TITGSSYGEI SSSRGIVRTN RMSCIFDDGE
IIDLAVKGTV FNFGRNGIRG TTILRNGKIV QMAGLSGILT GIGETGKALS STTSVSALGS
TSSLNGSDAA LNLLGNATAS VGAKLSDYYI QLAELYHPIV ELNPGNVVNI VFLEGFPLDA
LGIEKYEAKQ QVQESRSGNN QLLDVITNNP LANQLPQGVK AAMGAQTAPL TDFGSR