Gene VSAL_p840_05 details

Gene Information

• Locus tag: VSAL_p840_05
• Symbol: traK
• ID: 6961493
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Aliivibrio salmonicida LFI1238
• Kingdom: Bacteria
• Replicon accession: NC_011311
• Strand: +
• Start bp: 1592
• End bp: 2347
• Gene Length: 756 bp
• Protein Length: 251 aa
• Translation table: 11
• GC content: 49%
• Product: conjugative transfer protein TraK
• Protein accession: YP_002261495
• Protein GI: 215778355

Plasmid Coverage information

• Num covering plasmid clones: 57
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAGAAAA ACCCTAGCCA ACCTCTTGTC ATGATTGCAG CGGTGCTGCT CTCTTTTCTT 
TCTTTTGAAG GCAGGGCAAA AAACCTTCCC TCAAACACCT ACCCCTTTAA CGACAATGAC 
ACGGTGCCGA TTGTCCTGTC GTCATTGAAC ATCAATCGTC TCGTGGTTCG AGACGATAAA 
ATCATTGGTT TGGATTGCCC GACGGGGTTT TGCACCAGTA AAGGCAACAA ACAGGACGCG 
TCAGGCTCCA TTACGTTGCG ACTCAACATT GCCTTGCCGT TCACCGCGCA AGTGACCACC 
AAGAACGGCC GTAACTTTAC GCTGTTCATT ACCCCACGGG CGATACCCGC GCTGGTCTCT 
GAGTTTATTG GCACCGCCAA TACACGCCAA GAAAAAAGTG TGTTCACCCG TGACTTTGAT 
TACCCAACGG CCTTAACCCA ATTCACAAAA AGCATGATGC TCTGGAGTGA GCGCGGGTTT 
TTGATTGACG GCTTCTCTTT GCATCACGTA GACCCGAGCA CGTTACCCAA AGACACCAAC 
CCCCTGGCCA TCATTCCCCA AACGGTGTTT GTGGGAAAAG AGTACTCAGG CATCATTTAC 
CGTGTACTCA ATCAATCATC AGGACAAGTA ACCTTAAGCA CTTCCCAGTT CTATAGTTAC 
TCAACCCGAA GTGCGGCCAT CACCAAAGAC ACCTTGTTAC CCAATGAAGA CATGACGCTG 
TACATCGTGA CAGGAGGCGG CAACCATGCT CAATAA 

 

Protein sequence

MKKNPSQPLV MIAAVLLSFL SFEGRAKNLP SNTYPFNDND TVPIVLSSLN INRLVVRDDK 
IIGLDCPTGF CTSKGNKQDA SGSITLRLNI ALPFTAQVTT KNGRNFTLFI TPRAIPALVS 
EFIGTANTRQ EKSVFTRDFD YPTALTQFTK SMMLWSERGF LIDGFSLHHV DPSTLPKDTN 
PLAIIPQTVF VGKEYSGIIY RVLNQSSGQV TLSTSQFYSY STRSAAITKD TLLPNEDMTL 
YIVTGGGNHA Q