| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_R0009 |
|---|
| Symbol | |
|---|
| ID | 6876510 |
|---|
| Type | rRNA |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011206 |
|---|
| Strand | + |
|---|
| Start bp | 511806 |
|---|
| End bp | 513264 |
|---|
| Gene Length | 1459 bp |
|---|
| Protein Length | |
|---|
| Translation table | |
|---|
| GC content | 57% |
|---|
| IMG OID | 642788431 |
|---|
| Product | 16S ribosomal RNA |
|---|
| Protein accession | |
|---|
| Protein GI | |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.000834644 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.00771881 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | CTTCGGATGC TGACGAGTGG CGGACGGGTG AGTAATGCGT AGGAATCTGT CTTTTAGTGG
GGGACAACCC AGGGAAACTT GGGCTAATAC CGCATGAGCC CTGAGGGGGA AAGCGGGGGA
TCTTCGGACC TCGCGCTAAG AGAGGAGCCT ACGTCCGATT AGCTAGTTGG CGGGGTAAAG
GCCCACCAAG GCGACGATCG GTAGCTGGTC TGAGAGGACG ACCAGCCACA CTGGGACTGA
GACACGGCCC AGACTCCTAC GGGAGGCAGC AGTGGGGAAT TTTTCGCAAT GGGGGCAACC
CTGACGAAGC AATGCCGCGT GGATGAAGAA GGCCTTCGGG TTGTAAAGTC CTTTCGTGGA
GGACGAAAAG GTGGGTTCTA ATACAATCTG CTATTGACGT GAATCCAAGA AGAAGCACCG
GCTAACTCCG TGCCAGCAGC CGCGGTAATA CGGGGGGTGC AAGCGTTAAT CGGAATCACT
GGGCGTAAAG GGTGCGTAGG CGGTACGTTA GGTCTGTCGT GAAATCCCCG GGCTCAACCT
GGGAATGGCG GTGGAAACCG GTGTACTAGA GTATGGGAGA GGGTGGTGGA ATTCCAGGTG
TAGCGGTGAA ATGCGTAGAG ATCTGGAGGA ACATCAGTGG CGAAGGCGGC CACCTGGCCC
AATACTGACG CTGAGGCACG AAAGCGTGGG GAGCAAACAG GATTAGATAC CCTGGTAGTC
CACGCCCTAA ACGATGAATA CTAGATGTTT GGTGCCTAGC GTACTGAGTG TCGTAGCTAA
CGCGATAAGT ATTCCGCCTG GGAAGTACGG CCGCAAGGTT AAAACTCAAA GGAATTGACG
GGGGCCCGCA CAAGCGGTGG AGCATGTGGT TTAATTCGAT GCAACGCGAA GAACCTTACC
TGGGCTTGAC ATGTCCGGAA TTCTGCAGAG ATGCGGAAGT GCCCTTCGGG GAATCGGAAC
ACAGGTGCTG CATGGCTGTC GTCAGCTCGT GTCGTGAGAT GTTGGGTTAA GTCCCGCAAC
GAGCGCAACC CTTGTCCTTA GTTGCCAGCG GTTCGGCCGG GCACTCTAGG GAGACTGCCG
GTGACAAACC GGAGGAAGGT GGGGATGACG TCAAGTCCTC ATGGCCTTTA TGTCCAGGGC
TACACACGTG CTACAATGGC GCGTACAGAG GGAAGCCAAG CCGCGAGGTG GAGCAGACCC
CAGAAAGCGC GTCGTAGTTC GGATTGCAGT CTGCAACTCG ACTGCATGAA GTCGGAATCG
CTAGTAATCG CGGATCAGCA TGCCGCGGTG AATACGTTCC CGGGCCTTGT ACACACCGCC
CGTCACACCA TGGGAGTGGA TTGTACCAGA AGCAGCTAGC CTAACCTTCG GGAGGGCGGT
TACCACGGTA TGGTTCATGA CTGGGGTGAA GTCGTAACAA GGTAGCCGTA GGGGAACCTG
CGGCTGGATC ACCTCCTTT
|
|---|
| Protein sequence | |
|---|
| |