Gene Lferr_2899 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_2899 
Symbol 
ID6878903 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp2880194 
End bp2880526 
Gene Length333 bp 
Protein Length110 aa 
Translation table11 
GC content67% 
IMG OID642790752 
Productputative comEA-related protein 
Protein accessionYP_002221290 
Protein GI198284969 
COG category[L] Replication, recombination and repair 
COG ID[COG1555] DNA uptake protein and related DNA-binding proteins 
TIGRFAM ID[TIGR00426] competence protein ComEA helix-hairpin-helix repeat region 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.654196 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0678034 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCGACGGA GGAAAGCGGC CCGGAAGGGG TTGTGGCTGG GCTTGCCGTC CTTGTGCATG 
ATGGCCGCTG GCGCTTGGGC ACAGGCGGCC GGGACAGGCT GCCCGGTTCC CGTCGACATC
AATCACGCCG ATGCGGCCCA GTTGCGCTGT CTGCCGGGCA TTGGCGAAAA ACGGGCCGCC
GCGATCGTCG CTTTCCGGGA GGCGCATGGC CCCTTTCCCG GCCCCGCCTC CCTCGCCGCG
GTTGTTGGTC CCAAGATGGC GCAGACACTG CGCGCGAGGG TGGTGGTGAC CCCCGTTTCG
CCCTTGACAG AAAAAACCGC GCTGTTAAGG TGA
 
Protein sequence
MRRRKAARKG LWLGLPSLCM MAAGAWAQAA GTGCPVPVDI NHADAAQLRC LPGIGEKRAA 
AIVAFREAHG PFPGPASLAA VVGPKMAQTL RARVVVTPVS PLTEKTALLR