| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_2896 |
|---|
| Symbol | |
|---|
| ID | 6878900 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011206 |
|---|
| Strand | - |
|---|
| Start bp | 2877383 |
|---|
| End bp | 2878375 |
|---|
| Gene Length | 993 bp |
|---|
| Protein Length | 330 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 642790749 |
|---|
| Product | delta-aminolevulinic acid dehydratase |
|---|
| Protein accession | YP_002221287 |
|---|
| Protein GI | 198284966 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0113] Delta-aminolevulinic acid dehydratase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.259654 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.138325 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACCCGT TCAATCCGTC GTCCGGCCAC GAGCCACGAC GCCTGCGTCG CCATCCGGCC
ATGCGCCGGA TGTTGCGTGA ACACCATCTG CGCGCCACCG ATTTCATCCT CCCGGTTTTT
CTGGTGGAAG GCGAAGGCGT CCGCACGGAA ATCTCTTCCA TGCCCGGCGT TTTCCGCCAC
AGCATCGACT CCGCGCTGCA ACTCTGTGCG GAGGCGGTGG CGCGGGGTGT CTCCGGGGTG
CTGCTGTTTG GCGTCCTGGA GGAGCACTGC AAGGACGCCA CCGGCTCCGT CTCCTGGGAC
GCGGAGGGGC TGGTGCAACG GGCGATTCGC GCCATCCGCA GCGGATATCC GCAATTGCTG
ATCATTGCCG ACGCATGCTT TTGCGAATAC ACCGCCCACG GCCATTGCGG TGTGCTGGAT
GCGGGCGGTG ACCGGGACGA TTACGCCACC CTGGAAAACC TGCAGCGGCA GGCCATTTCT
TATGCGGAAG CGGGGGTGGA CGTCGTCGCC CCTTCGGGCA TGGTGGACGG CATGGTGATG
GCGATCCGCG AGGCGTTGGA CGCAGCGCGG CATCCGCAGG TCGGCATTCT GTCCTATGCG
GTCAAATACG CCAGCGCTTT TTATGGTCCT TTCCGCGATG CGGCCGACAG CGCGCCCCAG
TTCGGGGACC GCAAAGGCTA TCAGATGGAC CCCGCCAACC GGCGTGAGGC CTTTCGCGAA
ATGGCGCTGG ACATCCAGGA GGGCTGCGAC ATGGTGATGG TGAAGCCCGC CATGGCGTAT
CTGGATGTCA TCCGTGACCT TCGCGAGCGC TGCGACCTGC CGGTGCTGGC GTATCAGGTG
TCCGGTGAAT ACAGCATGCT GCAGGCCGCC GCCCGGGCCG GCTGGCTGGA TCTGCAGAGC
AGTGTCCTGG AATCCCTGCT CGGCATCAAA AGGGCCGGGG CCGATGCCAT CATCACCTAT
TATGCCCTCG CTGCGGCCGA TTGGTTGGGA TGA
|
|---|
| Protein sequence | MNPFNPSSGH EPRRLRRHPA MRRMLREHHL RATDFILPVF LVEGEGVRTE ISSMPGVFRH
SIDSALQLCA EAVARGVSGV LLFGVLEEHC KDATGSVSWD AEGLVQRAIR AIRSGYPQLL
IIADACFCEY TAHGHCGVLD AGGDRDDYAT LENLQRQAIS YAEAGVDVVA PSGMVDGMVM
AIREALDAAR HPQVGILSYA VKYASAFYGP FRDAADSAPQ FGDRKGYQMD PANRREAFRE
MALDIQEGCD MVMVKPAMAY LDVIRDLRER CDLPVLAYQV SGEYSMLQAA ARAGWLDLQS
SVLESLLGIK RAGADAIITY YALAAADWLG
|
|---|
| |