Gene Lferr_2895 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_2895 
Symbol 
ID6878899 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp2876722 
End bp2877432 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content64% 
IMG OID642790748 
ProductTonB family protein 
Protein accessionYP_002221286 
Protein GI198284965 
COG category 
COG ID 
TIGRFAM ID[TIGR01352] TonB family C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.130073 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCATCAT CACCTATTAT GCCCTCGCTG CGGCCGATTG GTTGGGATGA AGCCATAGGA 
TTCTTCGCGC CGCTATCGGA CGTTCTGTTC CGGATACGTT GGTTTGGCGC CGCCGCACCT
GCCGGTATGA CGCGCGTCCT GCGTTTGCGG CCGGAAGACC TTGATACCCT GTTCCCCTGG
GTCTTGCTCT CCGTGGCCAT CAACATGCTG GTCTGGCTGT TGCTGCTGGG CGGGCTGGAG
ATGTCTCTGC CGCCAAAAAC GCCCGTCAAC TCGCTGGTGG AAATTTCCCT GATGCCGAAC
CTGCTCCATC CCCGAATGAC CTCCCCCGCG AGGCCCGCGC CGCGCCGCCC GGACGGTGAT
CTTCCCATCA GCCGGGAGCA TGCACCGGCA ACGGCACCGG CGGCAGCGCG GGCAATCGCA
CTGAATGCCT ATCTGAAGGA CTGGGAAGGC CGGATCATGG CTCTGGCCCA GAAACGTCTC
CTTGGGGGAA GTCATCCCGC CGTACCTCAG GGTCGCGTCG TCGTCGCCGT CACCATCGCC
CCCGACGGGC GGCTGCTGGC GATCGAGATG CAGCAAGGAC TGCGGAATGC CGCGCTGGTA
CATGCCGTCG ATACGATCAT CCGGCAGGCG GCCCCCTTTC CACCTCTGCC CGCCATCTGG
CAATCCCCAC CCACGCCGCT GCGTATCGTG CGCACCTGGA GCTTCGAATA A
 
Protein sequence
MPSSPIMPSL RPIGWDEAIG FFAPLSDVLF RIRWFGAAAP AGMTRVLRLR PEDLDTLFPW 
VLLSVAINML VWLLLLGGLE MSLPPKTPVN SLVEISLMPN LLHPRMTSPA RPAPRRPDGD
LPISREHAPA TAPAAARAIA LNAYLKDWEG RIMALAQKRL LGGSHPAVPQ GRVVVAVTIA
PDGRLLAIEM QQGLRNAALV HAVDTIIRQA APFPPLPAIW QSPPTPLRIV RTWSFE