Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_2895 |
Symbol | |
ID | 6878899 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | - |
Start bp | 2876722 |
End bp | 2877432 |
Gene Length | 711 bp |
Protein Length | 236 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642790748 |
Product | TonB family protein |
Protein accession | YP_002221286 |
Protein GI | 198284965 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR01352] TonB family C-terminal domain |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.130073 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCATCAT CACCTATTAT GCCCTCGCTG CGGCCGATTG GTTGGGATGA AGCCATAGGA TTCTTCGCGC CGCTATCGGA CGTTCTGTTC CGGATACGTT GGTTTGGCGC CGCCGCACCT GCCGGTATGA CGCGCGTCCT GCGTTTGCGG CCGGAAGACC TTGATACCCT GTTCCCCTGG GTCTTGCTCT CCGTGGCCAT CAACATGCTG GTCTGGCTGT TGCTGCTGGG CGGGCTGGAG ATGTCTCTGC CGCCAAAAAC GCCCGTCAAC TCGCTGGTGG AAATTTCCCT GATGCCGAAC CTGCTCCATC CCCGAATGAC CTCCCCCGCG AGGCCCGCGC CGCGCCGCCC GGACGGTGAT CTTCCCATCA GCCGGGAGCA TGCACCGGCA ACGGCACCGG CGGCAGCGCG GGCAATCGCA CTGAATGCCT ATCTGAAGGA CTGGGAAGGC CGGATCATGG CTCTGGCCCA GAAACGTCTC CTTGGGGGAA GTCATCCCGC CGTACCTCAG GGTCGCGTCG TCGTCGCCGT CACCATCGCC CCCGACGGGC GGCTGCTGGC GATCGAGATG CAGCAAGGAC TGCGGAATGC CGCGCTGGTA CATGCCGTCG ATACGATCAT CCGGCAGGCG GCCCCCTTTC CACCTCTGCC CGCCATCTGG CAATCCCCAC CCACGCCGCT GCGTATCGTG CGCACCTGGA GCTTCGAATA A
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Protein sequence | MPSSPIMPSL RPIGWDEAIG FFAPLSDVLF RIRWFGAAAP AGMTRVLRLR PEDLDTLFPW VLLSVAINML VWLLLLGGLE MSLPPKTPVN SLVEISLMPN LLHPRMTSPA RPAPRRPDGD LPISREHAPA TAPAAARAIA LNAYLKDWEG RIMALAQKRL LGGSHPAVPQ GRVVVAVTIA PDGRLLAIEM QQGLRNAALV HAVDTIIRQA APFPPLPAIW QSPPTPLRIV RTWSFE
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