| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_2892 |
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| Symbol | |
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| ID | 6878896 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011206 |
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| Strand | - |
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| Start bp | 2873705 |
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| End bp | 2874253 |
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| Gene Length | 549 bp |
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| Protein Length | 182 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642790745 |
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| Product | dTDP-4-dehydrorhamnose 3,5-epimerase |
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| Protein accession | YP_002221283 |
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| Protein GI | 198284962 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1898] dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes |
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| TIGRFAM ID | [TIGR01221] dTDP-4-dehydrorhamnose 3,5-epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.290047 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | TTGAAAGTCG AAGCCCTCAG CATCCCCGAG GTTCTCCTCA TCGCCCCCAA GGTTTTCGGT
GACGTCCGGG GATTTTTCAT GGAAAGCTGG AATCGACGCG CCTTCGCTGC GGCCGGGCTG
GACCTCGACT TCGTGCAGGA CAACCACAGC CGCTCCCAGC AGGGCGTCCT GCGCGGGCTG
CACTATCAGA TTCATCAGCC CCAGGGCAAA CTGGTACGTG TCGTGAGCGG TGCGGTTTTC
GACGTGGCGG TGGATCTACG CCGCTCCTCG CCACACTTCG GACGATGGGC TGGCGCCACA
CTCTCCGCCG AAAATCAGCA GATGCTCTGG GTACCTCCTG GTTTCGCCCA CGGCTTTTAC
GTGCTCAGCG AGTCGGCGGA CTTTCTCTAC AAAACCACGG AGTTTTATGC CCCGGAAGCG
GAGCGCTGCG TGATCTGGAA CGACCCGGAT ATCGCCATCG ACTGGCCCCT GGTGGATGGT
AAGCCACCCC TGCTGGCCAC CAAGGATGCC GCCGGGCTGC CTTTATCGGC GAGTGAGACC
TTTCCGTGA
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| Protein sequence | MKVEALSIPE VLLIAPKVFG DVRGFFMESW NRRAFAAAGL DLDFVQDNHS RSQQGVLRGL
HYQIHQPQGK LVRVVSGAVF DVAVDLRRSS PHFGRWAGAT LSAENQQMLW VPPGFAHGFY
VLSESADFLY KTTEFYAPEA ERCVIWNDPD IAIDWPLVDG KPPLLATKDA AGLPLSASET
FP
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