Gene Lferr_2887 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_2887 
Symbol 
ID6878891 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp2868781 
End bp2869026 
Gene Length246 bp 
Protein Length81 aa 
Translation table11 
GC content67% 
IMG OID642790740 
Producthydrogenase assembly chaperone hypC/hupF 
Protein accessionYP_002221278 
Protein GI198284957 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0298] Hydrogenase maturation factor 
TIGRFAM ID[TIGR00074] hydrogenase assembly chaperone HypC/HupF 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.348602 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGCCTGG CGGTCCCCGT GCGGGTTGAA CGATTGCTGG ACAACGAGAT GGCGGTGGTC 
GGGATAGGCG GCCTGCGCAA GGAGATCTCC CTGGCCCTGG TGGACGGCGT CCGGGAGGGC
GATTACGTCA TCCTCCACGT GGGCTATGCT TTGACCCGGC TGGACCCGGA AGAGGCCGAA
CGGACCCTGG CCCTTTTCGC GGAACTGGCC GCCCGGCTGG ACGGCAGGGA AGGAACCGAG
CGGTGA
 
Protein sequence
MCLAVPVRVE RLLDNEMAVV GIGGLRKEIS LALVDGVREG DYVILHVGYA LTRLDPEEAE 
RTLALFAELA ARLDGREGTE R